Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00916 and BL05197

See DNA alignment / Visit BSNT_00916 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:28
# Commandline: needle
#    -asequence pep-align/BSNT_00916___ydeT.1.5803.seq
#    -bsequence pep-align/BL05197.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00916___ydeT-BL05197.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00916___ydeT-BL05197.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00916___ydeT
# 2: BL05197
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 115
# Identity:      56/115 (48.7%)
# Similarity:    77/115 (67.0%)
# Gaps:           4/115 ( 3.5%)
# Score: 308.0
# 
#
#=======================================

BSNT_00916___      1 ----MTIDVAAMTRCLKTLSDQTRLIMMRLFLEKEYCVCQLVDMFEMSQP     46
                         ..:|..:...|:|.|||.|||::::|..||.|||||||||||.|||
BL05197            1 MSVQTKLDSKSTVSCMKILSDSTRLLILKLLQEKPYCVCQLVDMFETSQP     50

BSNT_00916___     47 AISQHLRKLRNAGFVNEDRRGQWRYYSINGSCPEFDTLQLILHQIDQEDE     96
                     |||||||||::|..:.|.||.|||:||::...||.:.:..:|:|||..||
BL05197           51 AISQHLRKLKSANMIKEQRREQWRFYSLHDDFPERELVLAVLNQIDAHDE    100

BSNT_00916___     97 LLNHIKQKKTQACCQ    111
                     :|..:|:|:....|.
BL05197          101 VLQTVKRKERPVSCS    115


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