Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00916 and BL05197
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:28
# Commandline: needle
# -asequence dna-align/BSNT_00916___ydeT.1.5803.seq
# -bsequence dna-align/BL05197.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00916___ydeT-BL05197.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00916___ydeT-BL05197.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00916___ydeT
# 2: BL05197
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 377
# Identity: 228/377 (60.5%)
# Similarity: 228/377 (60.5%)
# Gaps: 70/377 (18.6%)
# Score: 609.0
#
#
#=======================================
BSNT_00916___ 1 ATG------------ACGATTGATGTTG-------CGGCGATGACTCGTT 31
||| |.|.||||| |.| |||.|| |.|
BL05197 1 ATGTCCGTACAAACAAAGCTTGAT-TCGAAAAGCACGGTGA------GCT 43
BSNT_00916___ 32 GTTTGAAAACACTTAGTGATCAAACTAGGCTTATAATGATGAGATTATTT 81
|..||||.|.|.|.||.|||...||..|.||..||||..|||.|.|..||
BL05197 44 GCATGAAGATATTGAGCGATTCTACCCGACTCTTAATTCTGAAACTGCTT 93
BSNT_00916___ 82 CTTGAAAAAGAATATTGTGTCTGTCAATTGGTTGATATGTTCGAAATGAG 131
|..||.|||..||||||.|||||.||..|.||.||||||||.||||..||
BL05197 94 CAGGAGAAACCATATTGCGTCTGCCAGCTTGTCGATATGTTTGAAACAAG 143
BSNT_00916___ 132 CCAGCCCGCCATAAGCCAGCATTTGCGGAAATTAAGAAACGCAGGTTTTG 181
|||||||||.||.||||||||||||||.||..|.|.||.||||..|.|..
BL05197 144 CCAGCCCGCAATCAGCCAGCATTTGCGAAAGCTGAAAAGCGCAAATATGA 193
BSNT_00916___ 182 TGAATGAGGACAGAAGAGGCCAATGGCGTTATTATTCAATAAATGGTTCC 231
|.||.||..|.|||||.|..||||||||||.|||||| |.|||.
BL05197 194 TCAAGGAACAGAGAAGGGAACAATGGCGTTTTTATTC-------GCTTCA 236
BSNT_00916___ 232 TGTCCTGAGTTT---GATACATTGC-AATTGAT-CTTAC--------ATC 268
||.| ||.||| || || || |||||.| |||.| |||
BL05197 237 TGAC--GACTTTCCGGA-AC---GCGAATTGGTCCTTGCCGTTCTCAATC 280
BSNT_00916___ 269 AAATCGAT---CAGGAGGATGAATTGTT-AAACCATATCAAACAAAAGAA 314
|.|||||| ||.||.||.| ||.|| |||||.| |.|||.|||||||
BL05197 281 AGATCGATGCACACGACGAGG--TTCTTCAAACCGT-TAAAAGAAAAGAA 327
BSNT_00916___ 315 A-ACTCAAGCGTGTTGC---CAGTAA- 336
| ||.| |||.| ||||.|
BL05197 328 AGACCC------GTTTCGTGCAGTTAA 348
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