Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02789 and BL05175

See DNA alignment / Visit BSNT_02789 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:33
# Commandline: needle
#    -asequence pep-align/BSNT_02789___hfq.1.5803.seq
#    -bsequence pep-align/BL05175___hfq.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02789___hfq-BL05175___hfq.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02789___hfq-BL05175___hfq.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02789___hfq
# 2: BL05175___hfq
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 73
# Identity:      70/73 (95.9%)
# Similarity:    72/73 (98.6%)
# Gaps:           0/73 ( 0.0%)
# Score: 357.0
# 
#
#=======================================

BSNT_02789___      1 MKPINIQDQFLNQIRKENTYVTVFLLNGFQLRGQVKGFDNFTVLLESEGK     50
                     ||.||||||||||||||||:||||||||||||||||||||||||:|||||
BL05175___hfq      1 MKSINIQDQFLNQIRKENTFVTVFLLNGFQLRGQVKGFDNFTVLIESEGK     50

BSNT_02789___     51 QQLIYKHAISTFAPQKNVQLELE     73
                     |||||||||||||||||||||||
BL05175___hfq     51 QQLIYKHAISTFAPQKNVQLELE     73


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