Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02789 and BL05175
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:33
# Commandline: needle
# -asequence dna-align/BSNT_02789___hfq.1.5803.seq
# -bsequence dna-align/BL05175___hfq.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02789___hfq-BL05175___hfq.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02789___hfq-BL05175___hfq.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02789___hfq
# 2: BL05175___hfq
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 222
# Identity: 188/222 (84.7%)
# Similarity: 188/222 (84.7%)
# Gaps: 0/222 ( 0.0%)
# Score: 804.0
#
#
#=======================================
BSNT_02789___ 1 ATGAAACCGATTAATATTCAGGATCAGTTTTTGAATCAAATCCGGAAAGA 50
||||||.||||.||||||||.|||||||||||||||||.||.||||||||
BL05175___hfq 1 ATGAAATCGATAAATATTCAAGATCAGTTTTTGAATCAGATTCGGAAAGA 50
BSNT_02789___ 51 AAATACGTATGTCACTGTTTTTTTGCTGAACGGCTTTCAGTTGCGGGGCC 100
||||||.|.||||||.||.|||||.|||||.||.||||||.||||.||.|
BL05175___hfq 51 AAATACATTTGTCACGGTCTTTTTACTGAATGGATTTCAGCTGCGCGGAC 100
BSNT_02789___ 101 AGGTGAAAGGCTTTGATAACTTTACCGTATTGTTGGAATCGGAAGGTAAG 150
|.||.|||||.|||||.||||||||.||.|||.|.|||||||||||.|||
BL05175___hfq 101 AAGTAAAAGGATTTGACAACTTTACAGTGTTGATTGAATCGGAAGGAAAG 150
BSNT_02789___ 151 CAGCAGCTTATATATAAACATGCGATCTCAACGTTTGCGCCGCAAAAAAA 200
||||||||.|||||.|||||.||.||.||.||||||||.|||||||||||
BL05175___hfq 151 CAGCAGCTCATATACAAACACGCCATTTCTACGTTTGCACCGCAAAAAAA 200
BSNT_02789___ 201 CGTCCAGCTTGAACTCGAATAG 222
|||.|||||.|||||.||||||
BL05175___hfq 201 CGTTCAGCTCGAACTGGAATAG 222
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