Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03912 and BL05170

See DNA alignment / Visit BSNT_03912 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:55
# Commandline: needle
#    -asequence pep-align/BSNT_03912___yraE.1.5803.seq
#    -bsequence pep-align/BL05170___yraE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03912___yraE-BL05170___yraE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03912___yraE-BL05170___yraE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03912___yraE
# 2: BL05170___yraE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 67
# Identity:      27/67 (40.3%)
# Similarity:    41/67 (61.2%)
# Gaps:           3/67 ( 4.5%)
# Score: 137.0
# 
#
#=======================================

BSNT_03912___      1 MEYALHEVLEVQEMTAFKTLCLTKSKTMKALVSDPKLKEIMQQDVDITTR     50
                     |..|:||.||:.|:..||.||||||.||..:|.|.:|::|:::|...|..
BL05170___yra      1 MNNAIHETLELHELLMFKNLCLTKSSTMTGMVQDQELRDILERDASQTKH     50

BSNT_03912___     51 QLQEFASILSNAKHE--     65
                     |::....:|| .:.|  
BL05170___yra     51 QIEHLQGLLS-VRGETV     66


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