Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03826 and BL05169
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:53
# Commandline: needle
# -asequence pep-align/BSNT_03826___yqeD.1.5803.seq
# -bsequence pep-align/BL05169___yqeD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03826___yqeD-BL05169___yqeD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03826___yqeD-BL05169___yqeD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03826___yqeD
# 2: BL05169___yqeD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 216
# Identity: 134/216 (62.0%)
# Similarity: 176/216 (81.5%)
# Gaps: 8/216 ( 3.7%)
# Score: 733.0
#
#
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BSNT_03826___ 1 MLKKVIGILVIIAIIAVGFFQKEAWLDAIKAGGMFSVLFSMLLIAADVFF 50
|::|:..|:::.:||||||..|::|||.|:.||::||||||||:||.|||
BL05169___yqe 1 MIRKLFTIIIMASIIAVGFVCKDSWLDVIRDGGVYSVLFSMLLVAACVFF 50
BSNT_03826___ 51 PIVPFALVAALNGAVFGTANGIWITLTGSMLGTILLFFLARYSFRDWARK 100
|||||||:|.||||:||.|||:.||||||||||:|||||:||.|||.||:
BL05169___yqe 51 PIVPFALIAGLNGALFGIANGVLITLTGSMLGTMLLFFLSRYGFRDMARR 100
BSNT_03826___ 101 KVQAYPAIQSYEASFNKNAFTAVLLGRLIPVIPSLIMNVICGLSQVRWHV 150
.:..||.:..|||.||:||||||||||||||||:::||::||||:|:|.|
BL05169___yqe 101 HLTKYPKMSEYEAYFNQNAFTAVLLGRLIPVIPAVVMNIVCGLSKVKWAV 150
BSNT_03826___ 151 FFFASLIGKIPNIVVVTIAGANFTSNKLLSISIYGAYILIIMLVIYKKFP 200
||.||.:||:||::||:||||||:.|||||:.:||.|:.||..|||:|:|
BL05169___yqe 151 FFAASTLGKVPNVLVVSIAGANFSENKLLSVGVYGLYMAIIAFVIYRKYP 200
BSNT_03826___ 201 HLLKVPKK-------- 208
||.:..|:
BL05169___yqe 201 HLTQKHKETKQTGKPS 216
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