Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02740 and BL05164
See
DNA alignment /
Visit
BSNT_02740 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:30
# Commandline: needle
# -asequence pep-align/BSNT_02740___recA.1.5803.seq
# -bsequence pep-align/BL05164___recA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02740___recA-BL05164___recA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02740___recA-BL05164___recA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02740___recA
# 2: BL05164___recA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 350
# Identity: 328/350 (93.7%)
# Similarity: 337/350 (96.3%)
# Gaps: 4/350 ( 1.1%)
# Score: 1640.5
#
#
#=======================================
BSNT_02740___ 1 MSDRQAALDMALKQIEKQFGKGSIMKLGEKTDTRISTVPSGSLALDTALG 50
|||||||||||||||||||||||||||||:|:||||||||||||||.|||
BL05164___rec 1 MSDRQAALDMALKQIEKQFGKGSIMKLGEQTETRISTVPSGSLALDAALG 50
BSNT_02740___ 51 IGGYPRGRIIEVYGPESSGKTTVALHAIAEVQQQGGQAAFIDAEHALDPV 100
:|||||||||||||||||||||||||||||||||||||||||||||||||
BL05164___rec 51 VGGYPRGRIIEVYGPESSGKTTVALHAIAEVQQQGGQAAFIDAEHALDPV 100
BSNT_02740___ 101 YAQKLGVNIEELLLSQPDTGEQALEIAEALVRSGAVDIVVVDSVAALVPK 150
|||||||||:||||||||||||||||||||||||||||||:|||||||||
BL05164___rec 101 YAQKLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDIVVIDSVAALVPK 150
BSNT_02740___ 151 AEIEGDMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVM 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BL05164___rec 151 AEIEGDMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVM 200
BSNT_02740___ 201 FGNPETTPGGRALKFYSSVRLEVRRAEQLKQGNDVMGNKTKIKVVKNKVA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BL05164___rec 201 FGNPETTPGGRALKFYSSVRLEVRRAEQLKQGNDVMGNKTKIKVVKNKVA 250
BSNT_02740___ 251 PPFRTAEVDIMYGEGISKEGEIIDLGTELDIVQKSGSWYSYEEERLGQGR 300
||||||||||||||||||||||||||||||||||||:||||:||||||||
BL05164___rec 251 PPFRTAEVDIMYGEGISKEGEIIDLGTELDIVQKSGAWYSYQEERLGQGR 300
BSNT_02740___ 301 ENAKQFLKENKDIMLMIQEQIREHYGLDNNGVVQQQAEE--TQEELEFEE 348
|||||||||||||:||||||||||||||..|....|.:| .||||||
BL05164___rec 301 ENAKQFLKENKDILLMIQEQIREHYGLDTGGAAPAQEDEAQAQEELEF-- 348
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.