Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02740 and BL05164
See
Amino acid alignment /
Visit
BSNT_02740 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:30
# Commandline: needle
# -asequence dna-align/BSNT_02740___recA.1.5803.seq
# -bsequence dna-align/BL05164___recA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02740___recA-BL05164___recA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02740___recA-BL05164___recA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02740___recA
# 2: BL05164___recA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1060
# Identity: 859/1060 (81.0%)
# Similarity: 859/1060 (81.0%)
# Gaps: 26/1060 ( 2.5%)
# Score: 3537.5
#
#
#=======================================
BSNT_02740___ 1 ATGAGTGATCGTCAGGCAGCCTTAGATATGGCTCTTAAACAAATAGAAAA 50
||||||||||||||||||||||||||||||||.|||||||||||||||||
BL05164___rec 1 ATGAGTGATCGTCAGGCAGCCTTAGATATGGCGCTTAAACAAATAGAAAA 50
BSNT_02740___ 51 ACAGTTCGGCAAAGGTTCCATTATGAAACTGGGAGAAAAGACAGATACAA 100
.|||||.||.||||||||.|||||||||||.||.|||.|.||.||.||.|
BL05164___rec 51 GCAGTTTGGTAAAGGTTCGATTATGAAACTCGGCGAACAAACTGAAACGA 100
BSNT_02740___ 101 GAATTTCTACTGTCCCAAGCGGCTCCCTCGCTCTTGATACAGCACTGGGA 150
|||||||.||.||.||.|||||.||..|.||.||.|||.|.||.||.|||
BL05164___rec 101 GAATTTCAACAGTTCCGAGCGGTTCTTTAGCGCTCGATGCGGCTCTTGGA 150
BSNT_02740___ 151 ATTGGCGGATATCCTCGCGGACGGATTATTGAAGTATACGGTCCTGAAAG 200
.|.||||||||.||.|||||.||||||||||||||||||||.||||||||
BL05164___rec 151 GTGGGCGGATACCCGCGCGGCCGGATTATTGAAGTATACGGGCCTGAAAG 200
BSNT_02740___ 201 CTCAGGTAAAACAACTGTGGCGCTTCATGCGATTGCTGAAGTTCAGCAGC 250
|||.||||||||.||.||||||||||||||||||||.|||||||||||||
BL05164___rec 201 CTCCGGTAAAACGACGGTGGCGCTTCATGCGATTGCCGAAGTTCAGCAGC 250
BSNT_02740___ 251 AGGGCGGACAAGCCGCGTTTATCGATGCGGAGCATGCGTTAGATCCGGTA 300
|||||||||||||.|||||.|||||.||.||.||.|||.|.|||||.||.
BL05164___rec 251 AGGGCGGACAAGCGGCGTTCATCGACGCCGAACACGCGCTTGATCCCGTC 300
BSNT_02740___ 301 TACGCGCAAAAGCTCGGTGTTAACATCGAGGAGCTTTTACTGTCTCAGCC 350
||.||.||||||||.||.||.|||||.||.||||||||.|||||.|||||
BL05164___rec 301 TATGCACAAAAGCTGGGCGTCAACATTGATGAGCTTTTGCTGTCACAGCC 350
BSNT_02740___ 351 TGACACAGGCGAGCAGGCGCTTGAAATTGCGGAAGCATTGGTTCGAAGCG 400
|||.||.||||||||||||||.|||||.||.|||||..|.||..||||||
BL05164___rec 351 TGATACGGGCGAGCAGGCGCTCGAAATCGCTGAAGCCCTTGTCAGAAGCG 400
BSNT_02740___ 401 GGGCAGTTGACATTGTCGTTGTCGACTCTGTAGCCGCTCTCGTTCCGAAA 450
|.||.||.||.||.||.||..|||||||||||||.||.||.||.||||||
BL05164___rec 401 GAGCGGTGGATATCGTTGTCATCGACTCTGTAGCAGCGCTTGTGCCGAAA 450
BSNT_02740___ 451 GCGGAAATTGAAGGCGACATGGGAGATTCTCATGTCGGTTTACAAGCACG 500
||.|||||.|||||.||.|||||.|||||.||.||||||||.||.||..|
BL05164___rec 451 GCTGAAATCGAAGGAGATATGGGGGATTCCCACGTCGGTTTGCAGGCCAG 500
BSNT_02740___ 501 CTTAATGTCTCAAGCGCTTCGTAAGCTTTCAGGGGCCATTAACAAATCGA 550
..|.||||||||.||||||||.||||||||.||.||.||.||.|||||||
BL05164___rec 501 ACTGATGTCTCAGGCGCTTCGCAAGCTTTCCGGAGCGATCAATAAATCGA 550
BSNT_02740___ 551 AGACAATCGCGATTTTCATTAACCAAATTCGTGAAAAAGTCGGCGTTATG 600
||||.||||||||.||.||.|||||.|||||||||||||||||.||.|||
BL05164___rec 551 AGACCATCGCGATCTTTATCAACCAGATTCGTGAAAAAGTCGGTGTCATG 600
BSNT_02740___ 601 TTCGGGAACCCGGAAACAACTCCTGGCGGCCGTGCGTTGAAATTCTACTC 650
||.||.||.||.||.||.||.||.|||||..|.|||.|||||||||||||
BL05164___rec 601 TTTGGAAATCCTGAGACGACGCCAGGCGGAAGAGCGCTGAAATTCTACTC 650
BSNT_02740___ 651 TTCCGTGCGTCTTGAAGTGCGCCGTGCTGAACAGCTGAAACAAGGCAACG 700
|||.||.||.||||||||||||||.||.||.|||||||||||||||||||
BL05164___rec 651 TTCTGTCCGCCTTGAAGTGCGCCGCGCAGAGCAGCTGAAACAAGGCAACG 700
BSNT_02740___ 701 ACGTAATGGGGAACAAAACGAAAATCAAAGTCGTGAAAAACAAGGTGGCT 750
||||.|||||||||||.||||||||||||||||||||||||||.|||||.
BL05164___rec 701 ACGTCATGGGGAACAAGACGAAAATCAAAGTCGTGAAAAACAAAGTGGCA 750
BSNT_02740___ 751 CCGCCGTTCCGTACAGCCGAGGTTGACATTATGTACGGAGAAGGCATTTC 800
||.||.|||||.||||||||.||.||||||||||||||.|||||.|||||
BL05164___rec 751 CCTCCATTCCGGACAGCCGAAGTGGACATTATGTACGGGGAAGGAATTTC 800
BSNT_02740___ 801 AAAAGAAGGCGAAATCATTGATCTAGGAACTGAACTTGATATCGTGCAAA 850
|||||||||.||||||||.||.||.|||||.||.|||||.|||||.||||
BL05164___rec 801 AAAAGAAGGGGAAATCATCGACCTCGGAACAGAGCTTGACATCGTTCAAA 850
BSNT_02740___ 851 AAAGCGGTTCATGGTACTCTTATGAAGAAGAGCGTCTTGGCCAAGGCCGT 900
|.||||||.||||||||||||||.|.||.||.||.|||||.|||||||||
BL05164___rec 851 AGAGCGGTGCATGGTACTCTTATCAGGAGGAACGCCTTGGACAAGGCCGT 900
BSNT_02740___ 901 GAAAATGCAAAACAATTCCTGAAAGAAAATAAAGATATCATGCTGATGAT 950
|||||.||.|||||.||||||||||||||.||.||||||.|..|||||||
BL05164___rec 901 GAAAACGCCAAACAGTTCCTGAAAGAAAACAAGGATATCCTTTTGATGAT 950
BSNT_02740___ 951 CCAGGAGCAAATTCGCGAACATTACGGCTTGGATAATAACGGAG------ 994
.||.|||||.||.||.||.||.|||||.|||||||.| ||||
BL05164___rec 951 TCAAGAGCAGATCCGGGAGCACTACGGTTTGGATACT---GGAGGCGCTG 997
BSNT_02740___ 995 -TAGTGCAGCAGCAAGCTGAAGAGACACAA------GAAGAACTCGAATT 1037
|..|||| |||.|| ||.|||.|.||| |||||||||||.||
BL05164___rec 998 CTCCTGCA-CAGGAA---GACGAGGCCCAAGCTCAGGAAGAACTCGAGTT 1043
BSNT_02740___ 1038 TGAAGAATAA 1047
|.||
BL05164___rec 1044 TTAA------ 1047
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.