Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02618 and BL05160

See DNA alignment / Visit BSNT_02618 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:18
# Commandline: needle
#    -asequence pep-align/BSNT_02618___rimM.1.5803.seq
#    -bsequence pep-align/BL05160___rimM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02618___rimM-BL05160___rimM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02618___rimM-BL05160___rimM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02618___rimM
# 2: BL05160___rimM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 174
# Identity:     129/174 (74.1%)
# Similarity:   157/174 (90.2%)
# Gaps:           0/174 ( 0.0%)
# Score: 717.0
# 
#
#=======================================

BSNT_02618___      1 MTKRWFNVGKIVNTHGIKGEVRVISKTDFAEERYKPGNTLYLFMDGRNEP     50
                     |.|:||||||||||||:||||||||:|||.||||||||.||||::|::||
BL05160___rim      1 MLKQWFNVGKIVNTHGVKGEVRVISRTDFPEERYKPGNALYLFLEGKDEP     50

BSNT_02618___     51 VEVTVNTHRLHKQFHLLQFKERQNLNEVEELKNAIIKVPEEELGELNEGE    100
                     |:|||:.||||||||||||||.:.|.|.|:||||:|||||::|.:|.|.|
BL05160___rim     51 VQVTVSAHRLHKQFHLLQFKEVETLTEAEKLKNALIKVPEDQLSQLAEDE    100

BSNT_02618___    101 FYFHEIIGCEVFTEEGELIGKVKEILTPGANDVWVIGRKGKKDALIPYIE    150
                     :||||||||:||:|:|:||||||||||||||||||:.|.||||||||||:
BL05160___rim    101 YYFHEIIGCDVFSEDGDLIGKVKEILTPGANDVWVVARPGKKDALIPYID    150

BSNT_02618___    151 SVVKHIDVREKKIEIELMEGLIDE    174
                     :|||.|:|.:|.|:|.:||||:||
BL05160___rim    151 AVVKEINVADKTIKIHIMEGLLDE    174


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