Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02502 and BL05158

See DNA alignment / Visit BSNT_02502 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence pep-align/BSNT_02502___ylbQ.1.5803.seq
#    -bsequence pep-align/BL05158___panE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02502___ylbQ-BL05158___panE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02502___ylbQ-BL05158___panE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02502___ylbQ
# 2: BL05158___panE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 298
# Identity:     167/298 (56.0%)
# Similarity:   197/298 (66.1%)
# Gaps:           5/298 ( 1.7%)
# Score: 822.0
# 
#
#=======================================

BSNT_02502___      1 MKIGIIGGGSVGLLCAYYLSLYHDVTVVTRRQEQAAAIRSEGIRLYKGGE     50
                     ||||:|||||||||.|||.|..|:|||:.||:|||.||..:||||.:.|:
BL05158___pan      1 MKIGVIGGGSVGLLFAYYFSFGHEVTVIARRKEQAEAIEEKGIRLLEDGK     50

BSNT_02502___     51 EFRADCSADTSINSDFDLLVVTVKQHQLQSVFSSLERIGKTNILFLQNGM    100
                     |...:....|.::.|.|||.|.||:|||.:|.|.||:....:|:||||||
BL05158___pan     51 EMTVNARGVTELDPDCDLLFVAVKEHQLGAVLSELEQAAPLDIMFLQNGM    100

BSNT_02502___    101 GHIHDLKDWHVGHSIYVGIVEHGAVRKSDTAVDHTGLGAIKWSAFDDAEP    150
                     .||..|:.|..||.||.|.|||||||..|....|||.||:|||||.....
BL05158___pan    101 AHIPVLEKWQTGHRIYTGSVEHGAVRVDDRTFRHTGKGAVKWSAFRSQSA    150

BSNT_02502___    151 DRLNIMFQHNHSDFPIYYETDWYRLLTGKLIVNACINPLTALLQVKNGEL    200
                     .||.......|..||..:..|||:.|..|||||||||||||||:||||.|
BL05158___pan    151 ARLKKELASVHEAFPFIWSEDWYKPLAEKLIVNACINPLTALLRVKNGAL    200

BSNT_02502___    201 LTTPAYLAFMKLVFQEACSILKLENEEKAWERVQAVCGQTKENRSSMLVD    250
                     |..|.|.|:||.||:||..||:||:.:.||:.|.:||.:||.|.||||.|
BL05158___pan    201 LEEPMYGAYMKFVFEEASRILELEDRQAAWDHVLSVCRRTKSNTSSMLAD    250

BSNT_02502___    251 VIGGRQTEADAIIGYLLKEASLQGLDAVHLEFLYGSIKALERNTNKVF    298
                     |:..|:||||||||||||.|...|..|.||.|||.||||||..     
BL05158___pan    251 VLAERKTEADAIIGYLLKRAKESGEPAPHLTFLYRSIKALENE-----    293


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