Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02438 and BL05149
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence pep-align/BSNT_02438___yktB.1.5803.seq
# -bsequence pep-align/BL05149___yktB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02438___yktB-BL05149___yktB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02438___yktB-BL05149___yktB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02438___yktB
# 2: BL05149___yktB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity: 153/212 (72.2%)
# Similarity: 178/212 (84.0%)
# Gaps: 1/212 ( 0.5%)
# Score: 820.0
#
#
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BSNT_02438___ 1 MTQMRFTEEDFNTFTIEGLDARMEVLKETVRPKLTALGEHFAPTLSALTG 50
|:.:|||||||.|||||||||||.|||:||||||..||:||||.||||||
BL05149___ykt 1 MSSLRFTEEDFRTFTIEGLDARMSVLKDTVRPKLQGLGDHFAPVLSALTG 50
BSNT_02438___ 51 DEMFPHVAKHARRSVNPPADSWVAFANSKRGYKKLPHFQIGLWESHVFVW 100
||||.|||||||||||||.||||||||:||||||||||||||||:|||||
BL05149___ykt 51 DEMFVHVAKHARRSVNPPDDSWVAFANNKRGYKKLPHFQIGLWETHVFVW 100
BSNT_02438___ 101 FAIIYESPIKEEYGKLLEMNQETITKNIPDSFVWSADHTKPGVHKQSEMD 150
||:|||||:|:|||:|.:.:...|..:||..|.||||||||...:||||:
BL05149___ykt 101 FALIYESPLKQEYGQLFKKHLPDIESSIPSRFFWSADHTKPDAKRQSEMN 150
BSNT_02438___ 151 KEQLKTLFERLQTVKKAELLCGIQLQKEEVLNMNNQEFLQRIDDAFKQLA 200
::.|:.|||||..|||||.||||||.|:|||:|:.:.||..|:.||::||
BL05149___ykt 151 EKDLENLFERLVNVKKAEALCGIQLSKDEVLHMSEEAFLSEIEAAFEKLA 200
BSNT_02438___ 201 FLYRLTQKVSQA 212
||||||||||.
BL05149___ykt 201 FLYRLTQKVSV- 211
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