Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02438 and BL05149
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence dna-align/BSNT_02438___yktB.1.5803.seq
# -bsequence dna-align/BL05149___yktB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02438___yktB-BL05149___yktB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02438___yktB-BL05149___yktB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02438___yktB
# 2: BL05149___yktB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 679
# Identity: 461/679 (67.9%)
# Similarity: 461/679 (67.9%)
# Gaps: 83/679 (12.2%)
# Score: 1514.5
#
#
#=======================================
BSNT_02438___ 1 ATGA-CA--CAAATGCGTTTCACTGAAGAGGACTTTAACACATTTACAAT 47
|||| || | |||||||.|||||||||||.|||...|||||||||||
BL05149___ykt 1 ATGAGCAGTC---TGCGTTTTACTGAAGAGGATTTTCGTACATTTACAAT 47
BSNT_02438___ 48 AGAAGGCTTAGACGCGCGCATGGAAGTATTAAAAGAGACGGTCCGTCCGA 97
||||||.|||||.|||||.|||...||..|.|||||.||.||.||.||||
BL05149___ykt 48 AGAAGGTTTAGATGCGCGGATGAGCGTTCTGAAAGACACAGTGCGCCCGA 97
BSNT_02438___ 98 AGCTTACAGCTCTAGGCGAACATTTTGCCCCAACTTTATCAGCTTTAACC 147
|.|||..||..||.|||||.||||||||.||...|.|.||.|||||.||.
BL05149___ykt 98 AACTTCAAGGGCTCGGCGATCATTTTGCGCCTGTTCTGTCCGCTTTGACA 147
BSNT_02438___ 148 GGAGATGAAATGTTTCCGCATGTGGCAAAGCATGCAAGAAGATCCGTCAA 197
|||||.|||||||||...||.||.||.|||||.||..|..|.||.|||||
BL05149___ykt 148 GGAGACGAAATGTTTGTCCACGTCGCCAAGCACGCGCGCCGCTCAGTCAA 197
BSNT_02438___ 198 TCCCCCTGCTGACAGCTGGGTGGCGTTCGCAAACAGCAAAAGAGGCTATA 247
|||.||.|..|||||||||||.||.||||||||||..||..|.|||||||
BL05149___ykt 198 TCCGCCGGACGACAGCTGGGTTGCTTTCGCAAACAATAAGCGCGGCTATA 247
BSNT_02438___ 248 AAAAACTGCCACATTTCCAAATTGGTTTATGGGAAAGCCACGTCTTTGTG 297
||||.|||||.|||||||||||||||||||||||||.||||||.||.||.
BL05149___ykt 248 AAAAGCTGCCGCATTTCCAAATTGGTTTATGGGAAACCCACGTTTTCGTA 297
BSNT_02438___ 298 TGGTTCGCGATT-ATTTATGAATCCCCTATCAAAGAAGAATACGGCAAAT 346
|||||.|| ||| ||.|||||.||||||.||||..|.|||||||||.|..
BL05149___ykt 298 TGGTTTGC-ATTGATCTATGAGTCCCCTCTCAAGCAGGAATACGGCCAGC 346
BSNT_02438___ 347 TGCTTGAAATGAACCAAGAAACCATTACGAAAAATATCCCTGACA----- 391
||.|| |||||.| ||.|.||.||.|
BL05149___ykt 347 TGTTT----------AAGAAGC-----------ATCTGCCGGATATTGAG 375
BSNT_02438___ 392 ----------------GCTTCGTTTGGTCTGCAGATCACACAAAACCGG- 424
||||..|.|||||.||.|||||.||.|||||||
BL05149___ykt 376 AGCAGCATTCCAAGTCGCTTTTTCTGGTCGGCCGATCATACGAAACCGGA 425
BSNT_02438___ 425 ------GAGTACATAAACAGTCTGAAATG---GACAAGGAACAGCTGAAG 465
||| |||||||||.||| ||.||.||.|.| |||.
BL05149___ykt 426 TGCCAAGAG-------ACAGTCTGAGATGAATGAAAAAGATCTG--GAAA 466
BSNT_02438___ 466 ACACTGTTTGAGCG--TTTGCAGACTGTAAAGAAAGCTG-AGCTGTTATG 512
|| ||||||||.|| |...|| || ||.||||||||.| ||| |.|.||
BL05149___ykt 467 AC-CTGTTTGAACGGCTCGTCA-AC-GTGAAGAAAGCAGAAGC-GCTTTG 512
BSNT_02438___ 513 CGGCATCCAGCTCCAAAAAGAAGAAGTGCTGAATATGAATAACCAGGAAT 562
|||.||.|||||....|||||.||.||||||.||||||.|.|..|||..|
BL05149___ykt 513 CGGTATTCAGCTTTCTAAAGACGAGGTGCTGCATATGAGTGAAGAGGCGT 562
BSNT_02438___ 563 TCCT-TCAGCG-TATCGACGATGCCTTTAAGCAGCTTGCTTTTCTGTACC 610
|.|| || || .|||||.|..||.|||.|..||||.||.||.||.||||
BL05149___ykt 563 TTCTATC--CGAAATCGAAGCGGCTTTTGAAAAGCTCGCCTTCCTTTACC 610
BSNT_02438___ 611 GCCTCACCCAAAAAGTATCACAAGCATAA 639
||||.||.||.|||||||| .|.||||
BL05149___ykt 611 GCCTGACGCAGAAAGTATC---GGTATAA 636
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