Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02241 and BL05133

See DNA alignment / Visit BSNT_02241 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence pep-align/BSNT_02241___ykoL.1.5803.seq
#    -bsequence pep-align/BL05133___ykoL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02241___ykoL-BL05133___ykoL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02241___ykoL-BL05133___ykoL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02241___ykoL
# 2: BL05133___ykoL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 61
# Identity:      33/61 (54.1%)
# Similarity:    44/61 (72.1%)
# Gaps:           3/61 ( 4.9%)
# Score: 165.0
# 
#
#=======================================

BSNT_02241___      1 MSNLLKSALEKERRHYSEKLYQIGVYNKEVMNKMTISELRKEYAYFFR-S     49
                     ||.|||:||||||.||.:||..:|.:|:||:.:|||:|||.||.|||| :
BL05133___yko      1 MSRLLKNALEKERNHYLKKLISLGEHNREVLQRMTITELRNEYFYFFRKN     50

BSNT_02241___     50 ITNHKNYPYTR     60
                     ....:|.|:  
BL05133___yko     51 KARVQNRPF--     59


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