Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02241 and BL05133
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:45
# Commandline: needle
# -asequence dna-align/BSNT_02241___ykoL.1.5803.seq
# -bsequence dna-align/BL05133___ykoL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02241___ykoL-BL05133___ykoL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02241___ykoL-BL05133___ykoL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02241___ykoL
# 2: BL05133___ykoL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity: 117/213 (54.9%)
# Similarity: 117/213 (54.9%)
# Gaps: 63/213 (29.6%)
# Score: 314.0
#
#
#=======================================
BSNT_02241___ 1 ATGAGTAATTTATTGAAATCCGCTTTAGAAAAAGAACGACGCCATTATTC 50
|||||.|..||.||.|||..||||||.|||||.|||.||..||||||.|
BL05133___yko 1 ATGAGCAGATTGTTAAAAAACGCTTTGGAAAAGGAAAGAAACCATTACT- 49
BSNT_02241___ 51 TGAAAA----------ACTCTATCAG----ATTGGG--GTTTATAATAAA 84
|||||| ||||..|.|| ||.||| |||| |..|
BL05133___yko 50 TGAAAAAACTGATCTCACTCGGTGAGCATAATCGGGAAGTTT----TGCA 95
BSNT_02241___ 85 GAGGTCATGAACAAAATGACGATTTCTGAGCTTCGGAAA-GAATACGCTT 133
|||| |||||||||.|.|||| ||.|||| |||||...||
BL05133___yko 96 GAGG-----------ATGACGATTACGGAGC-TCAGAAATGAATATTTTT 133
BSNT_02241___ 134 ATTTCTTTCGAAGCATTACAAATCATAAAAATTATCCTTATACAAGATAA 183
||||.||.||.| ||| ||||| ..||.|.|.||| ||
BL05133___yko 134 ATTTTTTCCGGA-------AAA--ATAAA----GCCCGTGTTCAA---AA 167
BSNT_02241___ 183 ------------- 183
BL05133___yko 168 TCGGCCATTTTGA 180
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