Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01942 and BL05111

See DNA alignment / Visit BSNT_01942 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:28
# Commandline: needle
#    -asequence pep-align/BSNT_01942___ppnK.1.5803.seq
#    -bsequence pep-align/BL05111___ppnK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01942___ppnK-BL05111___ppnK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01942___ppnK-BL05111___ppnK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01942___ppnK
# 2: BL05111___ppnK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity:     227/267 (85.0%)
# Similarity:   245/267 (91.8%)
# Gaps:           1/267 ( 0.4%)
# Score: 1198.0
# 
#
#=======================================

BSNT_01942___      1 -MKFAVSSKGDQVSDTLKSKIQAYLLDFDMELDENEPEIVISVGGDGTLL     49
                      |||||||||:.|||:||||||.|||||.:|.||.||:||||||||||||
BL05111___ppn      1 MMKFAVSSKGNAVSDSLKSKIQTYLLDFGLECDEEEPDIVISVGGDGTLL     50

BSNT_01942___     50 YAFHRYSDRLDKTAFVGVHTGHLGFYADWVPHEIEKLVLAIAKTPYHTVE     99
                     ||||:||.|||||||||||||||||||||||.||||||:|||||||..||
BL05111___ppn     51 YAFHKYSGRLDKTAFVGVHTGHLGFYADWVPSEIEKLVIAIAKTPYQIVE    100

BSNT_01942___    100 YPLLEVIVTYHENEREERYLALNECTIKSIEGSLVADVEIKGQLFETFRG    149
                     ||:|||||.|::...|.|||||||||||||||:||.||||||:|||||||
BL05111___ppn    101 YPVLEVIVRYNDGSDEARYLALNECTIKSIEGTLVTDVEIKGELFETFRG    150

BSNT_01942___    150 DGLCLSTPSGSTAYNKALGGAIIHPSIRAIQLAEMASINNRVFRTVGSPL    199
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL05111___ppn    151 DGLCLSTPSGSTAYNKALGGAIIHPSIRAIQLAEMASINNRVFRTVGSPL    200

BSNT_01942___    200 LLPSHHDCMIKPRNEVDFQVTIDHLTLLHKDVKSIRCQVASEKVRFARFR    249
                     :||.||.|:|||.|:|.|||.||||||||||||||:|:||:|.:||||||
BL05111___ppn    201 ILPEHHTCLIKPINDVTFQVAIDHLTLLHKDVKSIQCRVANENIRFARFR    250

BSNT_01942___    250 PFPFWKRVQDSFIGKGE    266
                     |||||||||||||||||
BL05111___ppn    251 PFPFWKRVQDSFIGKGE    267


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