Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01942 and BL05111
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:28
# Commandline: needle
# -asequence dna-align/BSNT_01942___ppnK.1.5803.seq
# -bsequence dna-align/BL05111___ppnK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01942___ppnK-BL05111___ppnK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01942___ppnK-BL05111___ppnK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01942___ppnK
# 2: BL05111___ppnK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 809
# Identity: 623/809 (77.0%)
# Similarity: 623/809 (77.0%)
# Gaps: 13/809 ( 1.6%)
# Score: 2351.5
#
#
#=======================================
BSNT_01942___ 1 ---ATGAAATTTGCCGTATCATCAAAAGGAGATCAAGTTTCTGATACGCT 47
|||||.|||||.|||||.||.||||||.||...|||||||||.|..|
BL05111___ppn 1 ATGATGAAGTTTGCGGTATCGTCCAAAGGAAATGCGGTTTCTGATTCATT 50
BSNT_01942___ 48 GAAAAGCAAAATACAGGCGTATTTATTGGATTTTGATATGGAACTG-GAT 96
||||||||||||.|||.|||||.|..|.||.||.|.|.|.||| || |||
BL05111___ppn 51 GAAAAGCAAAATTCAGACGTATCTGCTCGACTTCGGTCTCGAA-TGCGAT 99
BSNT_01942___ 97 GAAAATGAACCGGAAATCGTTATTTCAGTCGGAGGCGACGGAACGCTTTT 146
|||.|.||.|||||.|||||.|||||.|||||.||.|||||||||||.||
BL05111___ppn 100 GAAGAAGAGCCGGATATCGTCATTTCCGTCGGCGGTGACGGAACGCTCTT 149
BSNT_01942___ 147 GTATGCTTTTCACAGATACAGCGACCGCTTGGACAAAACAGCATTTGTCG 196
.||.||.|||||||.||||||||.||||.|.||||||||.||.|||||||
BL05111___ppn 150 ATACGCATTTCACAAATACAGCGGCCGCCTCGACAAAACGGCTTTTGTCG 199
BSNT_01942___ 197 GCGTTCACACAGGTCATCTGGGTTTTTATGCCGACTGGGTTCCTCATGAA 246
|.|||||.||.||.|||||.||.|||||||||||||||||.||...|||.
BL05111___ppn 200 GGGTTCATACCGGGCATCTCGGCTTTTATGCCGACTGGGTCCCGAGTGAG 249
BSNT_01942___ 247 ATTGAAAAACTTGTTCTTGCCATCGCGAAAACGCCGTATCATACAGTCGA 296
||||||||.||.||..|.||.||.|||||||||||||||||.|..||.||
BL05111___ppn 250 ATTGAAAAGCTCGTGATCGCGATTGCGAAAACGCCGTATCAAATTGTTGA 299
BSNT_01942___ 297 ATATCCGCTTCTCGAAGTCATTGTGACCTATCACGAAAACG--AGCG-GG 343
|||||||.||.|.||||||||.||...||||.|.| ||| |||| .|
BL05111___ppn 300 ATATCCGGTTTTGGAAGTCATCGTCCGCTATAATG---ACGGCAGCGATG 346
BSNT_01942___ 344 AAGAAAGATACTTAGCTTTGAATGAATGTACGATTAAAAGCATCGAAGGA 393
|||..|||||.||.||..||||.|||||||||||.||.|||||.||||||
BL05111___ppn 347 AAGCGAGATATTTGGCGCTGAACGAATGTACGATCAAGAGCATTGAAGGA 396
BSNT_01942___ 394 AGCCTTGTTGCTGATGTGGAAATCAAAGGGCAGCTCTTTGAAACCTTCCG 443
|..|||||..|.|||||.||.||.||||||.|.||.||||||||.|||||
BL05111___ppn 397 ACGCTTGTGACGGATGTCGAGATTAAAGGGGAACTTTTTGAAACGTTCCG 446
BSNT_01942___ 444 GGGCGACGGCCTCTGCCTGTCAACTCCATCAGGCAGCACAGCCTACAATA 493
.|||||||||||.||.|||||.|||||.||.||.||.||.||.||.||.|
BL05111___ppn 447 CGGCGACGGCCTTTGTCTGTCGACTCCTTCCGGAAGTACGGCATATAACA 496
BSNT_01942___ 494 AGGCGCTGGGCGGAGCGATTATCCATCCGTCTATCAGGGCGATCCAGCTT 543
|||||||.|||||.||||||||.||||||||.|||||||||||||||||.
BL05111___ppn 497 AGGCGCTTGGCGGTGCGATTATTCATCCGTCCATCAGGGCGATCCAGCTG 546
BSNT_01942___ 544 GCGGAAATGGCTTCAATTAATAACCGCGTGTTCCGTACGGTCGGGTCACC 593
||.||||||||.||.||.||.|||||.|||||.||.||||||||.||.||
BL05111___ppn 547 GCTGAAATGGCGTCGATCAACAACCGGGTGTTTCGGACGGTCGGATCGCC 596
BSNT_01942___ 594 TCTGCTTCTCCCATCCCATCATGATTGCATGATTAAGCCGAGAAACGAAG 643
.||..||||.||....|||||...|||..|.|||||.||||.|||.||.|
BL05111___ppn 597 GCTCATTCTGCCTGAGCATCACACTTGTTTAATTAAACCGATAAATGATG 646
BSNT_01942___ 644 TTGAC-TTTCAAGTGACGATTGACCATTTAACCCTTCTCCATAAGGATGT 692
|||| ||||||||..||||||||||.||.||..|.||.|||||.||.||
BL05111___ppn 647 -TGACGTTTCAAGTCGCGATTGACCACTTGACATTGCTGCATAAAGACGT 695
BSNT_01942___ 693 AAAGTCGATCCGCTGCCAAGTTGCATCCGAAAAAGTGCGGTTTGCGAGAT 742
.||||||||.|..||||..||.|||..||||||..|..|||||||..|.|
BL05111___ppn 696 CAAGTCGATTCAATGCCGCGTCGCAAACGAAAATATCAGGTTTGCCCGCT 745
BSNT_01942___ 743 TCCGTCCGTTTCCATTTTGGAAAAGAGTCCAGGATTCGTTTATTGGAAAA 792
|..|.||||||||.|||||||||||.|||||||||||.|||||.||||||
BL05111___ppn 746 TTAGGCCGTTTCCGTTTTGGAAAAGGGTCCAGGATTCCTTTATCGGAAAA 795
BSNT_01942___ 793 GGTGAATAG 801
||.||||||
BL05111___ppn 796 GGAGAATAG 804
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