Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01942 and BL05111

See Amino acid alignment / Visit BSNT_01942 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:28
# Commandline: needle
#    -asequence dna-align/BSNT_01942___ppnK.1.5803.seq
#    -bsequence dna-align/BL05111___ppnK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01942___ppnK-BL05111___ppnK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01942___ppnK-BL05111___ppnK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01942___ppnK
# 2: BL05111___ppnK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 809
# Identity:     623/809 (77.0%)
# Similarity:   623/809 (77.0%)
# Gaps:          13/809 ( 1.6%)
# Score: 2351.5
# 
#
#=======================================

BSNT_01942___      1 ---ATGAAATTTGCCGTATCATCAAAAGGAGATCAAGTTTCTGATACGCT     47
                        |||||.|||||.|||||.||.||||||.||...|||||||||.|..|
BL05111___ppn      1 ATGATGAAGTTTGCGGTATCGTCCAAAGGAAATGCGGTTTCTGATTCATT     50

BSNT_01942___     48 GAAAAGCAAAATACAGGCGTATTTATTGGATTTTGATATGGAACTG-GAT     96
                     ||||||||||||.|||.|||||.|..|.||.||.|.|.|.||| || |||
BL05111___ppn     51 GAAAAGCAAAATTCAGACGTATCTGCTCGACTTCGGTCTCGAA-TGCGAT     99

BSNT_01942___     97 GAAAATGAACCGGAAATCGTTATTTCAGTCGGAGGCGACGGAACGCTTTT    146
                     |||.|.||.|||||.|||||.|||||.|||||.||.|||||||||||.||
BL05111___ppn    100 GAAGAAGAGCCGGATATCGTCATTTCCGTCGGCGGTGACGGAACGCTCTT    149

BSNT_01942___    147 GTATGCTTTTCACAGATACAGCGACCGCTTGGACAAAACAGCATTTGTCG    196
                     .||.||.|||||||.||||||||.||||.|.||||||||.||.|||||||
BL05111___ppn    150 ATACGCATTTCACAAATACAGCGGCCGCCTCGACAAAACGGCTTTTGTCG    199

BSNT_01942___    197 GCGTTCACACAGGTCATCTGGGTTTTTATGCCGACTGGGTTCCTCATGAA    246
                     |.|||||.||.||.|||||.||.|||||||||||||||||.||...|||.
BL05111___ppn    200 GGGTTCATACCGGGCATCTCGGCTTTTATGCCGACTGGGTCCCGAGTGAG    249

BSNT_01942___    247 ATTGAAAAACTTGTTCTTGCCATCGCGAAAACGCCGTATCATACAGTCGA    296
                     ||||||||.||.||..|.||.||.|||||||||||||||||.|..||.||
BL05111___ppn    250 ATTGAAAAGCTCGTGATCGCGATTGCGAAAACGCCGTATCAAATTGTTGA    299

BSNT_01942___    297 ATATCCGCTTCTCGAAGTCATTGTGACCTATCACGAAAACG--AGCG-GG    343
                     |||||||.||.|.||||||||.||...||||.|.|   |||  |||| .|
BL05111___ppn    300 ATATCCGGTTTTGGAAGTCATCGTCCGCTATAATG---ACGGCAGCGATG    346

BSNT_01942___    344 AAGAAAGATACTTAGCTTTGAATGAATGTACGATTAAAAGCATCGAAGGA    393
                     |||..|||||.||.||..||||.|||||||||||.||.|||||.||||||
BL05111___ppn    347 AAGCGAGATATTTGGCGCTGAACGAATGTACGATCAAGAGCATTGAAGGA    396

BSNT_01942___    394 AGCCTTGTTGCTGATGTGGAAATCAAAGGGCAGCTCTTTGAAACCTTCCG    443
                     |..|||||..|.|||||.||.||.||||||.|.||.||||||||.|||||
BL05111___ppn    397 ACGCTTGTGACGGATGTCGAGATTAAAGGGGAACTTTTTGAAACGTTCCG    446

BSNT_01942___    444 GGGCGACGGCCTCTGCCTGTCAACTCCATCAGGCAGCACAGCCTACAATA    493
                     .|||||||||||.||.|||||.|||||.||.||.||.||.||.||.||.|
BL05111___ppn    447 CGGCGACGGCCTTTGTCTGTCGACTCCTTCCGGAAGTACGGCATATAACA    496

BSNT_01942___    494 AGGCGCTGGGCGGAGCGATTATCCATCCGTCTATCAGGGCGATCCAGCTT    543
                     |||||||.|||||.||||||||.||||||||.|||||||||||||||||.
BL05111___ppn    497 AGGCGCTTGGCGGTGCGATTATTCATCCGTCCATCAGGGCGATCCAGCTG    546

BSNT_01942___    544 GCGGAAATGGCTTCAATTAATAACCGCGTGTTCCGTACGGTCGGGTCACC    593
                     ||.||||||||.||.||.||.|||||.|||||.||.||||||||.||.||
BL05111___ppn    547 GCTGAAATGGCGTCGATCAACAACCGGGTGTTTCGGACGGTCGGATCGCC    596

BSNT_01942___    594 TCTGCTTCTCCCATCCCATCATGATTGCATGATTAAGCCGAGAAACGAAG    643
                     .||..||||.||....|||||...|||..|.|||||.||||.|||.||.|
BL05111___ppn    597 GCTCATTCTGCCTGAGCATCACACTTGTTTAATTAAACCGATAAATGATG    646

BSNT_01942___    644 TTGAC-TTTCAAGTGACGATTGACCATTTAACCCTTCTCCATAAGGATGT    692
                      |||| ||||||||..||||||||||.||.||..|.||.|||||.||.||
BL05111___ppn    647 -TGACGTTTCAAGTCGCGATTGACCACTTGACATTGCTGCATAAAGACGT    695

BSNT_01942___    693 AAAGTCGATCCGCTGCCAAGTTGCATCCGAAAAAGTGCGGTTTGCGAGAT    742
                     .||||||||.|..||||..||.|||..||||||..|..|||||||..|.|
BL05111___ppn    696 CAAGTCGATTCAATGCCGCGTCGCAAACGAAAATATCAGGTTTGCCCGCT    745

BSNT_01942___    743 TCCGTCCGTTTCCATTTTGGAAAAGAGTCCAGGATTCGTTTATTGGAAAA    792
                     |..|.||||||||.|||||||||||.|||||||||||.|||||.||||||
BL05111___ppn    746 TTAGGCCGTTTCCGTTTTGGAAAAGGGTCCAGGATTCCTTTATCGGAAAA    795

BSNT_01942___    793 GGTGAATAG    801
                     ||.||||||
BL05111___ppn    796 GGAGAATAG    804


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