Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01868 and BL05106

See DNA alignment / Visit BSNT_01868 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:22
# Commandline: needle
#    -asequence pep-align/BSNT_01868.1.5803.seq
#    -bsequence pep-align/BL05106.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01868-BL05106.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01868-BL05106.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01868
# 2: BL05106
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 65
# Identity:      38/65 (58.5%)
# Similarity:    47/65 (72.3%)
# Gaps:           3/65 ( 4.6%)
# Score: 178.0
# 
#
#=======================================

BSNT_01868         1 MRNELFQQAKSFVQQAVMVTNGFEEGDQEQAILRAKNAVSSAYANSTDAE     50
                     |||||||.||:.|..|   ....:.|::.:|:.|||||:|||||||||||
BL05106            1 MRNELFQMAKAAVHAA---EASADSGEKAKAVARAKNALSSAYANSTDAE     47

BSNT_01868        51 RQQLHQFQNQLDKLQ     65
                     |:|||..|.|||:|.
BL05106           48 RRQLHNLQEQLDQLS     62


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