Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01868 and BL05106
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:23
# Commandline: needle
# -asequence dna-align/BSNT_01868.1.5803.seq
# -bsequence dna-align/BL05106.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01868-BL05106.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01868-BL05106.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01868
# 2: BL05106
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 208
# Identity: 139/208 (66.8%)
# Similarity: 139/208 (66.8%)
# Gaps: 29/208 (13.9%)
# Score: 435.0
#
#
#=======================================
BSNT_01868 1 ATGAGAAATGAACTGTTTCAGCAGGCAAAATCATTTGTTCAACAGGCGGT 50
||||||||.|||||||||||...|||.|||.|| ||.||
BL05106 1 ATGAGAAACGAACTGTTTCAAATGGCCAAAGCA------------GCCGT 38
BSNT_01868 51 -CATGGTGACA----AACGGCTT-TGAGGA---AGGCGATCAGGAGCAAG 91
|||| || || |||| .|.||| ||||||..|||.|.|||
BL05106 39 ACATG----CAGCTGAA--GCTTCGGCGGATTCAGGCGAAAAGGCGAAAG 82
BSNT_01868 92 CGATTCTGAGAGCCAAAAATGCTGTATCTTCTGCGTATGCCAATTCGACA 141
|..||...|||||.|||||.||..|.||.||.||||||||||||||.||.
BL05106 83 CCGTTGCAAGAGCTAAAAACGCCCTTTCCTCGGCGTATGCCAATTCAACT 132
BSNT_01868 142 GATGCGGAACGTCAACAGCTGCATCAAT-TTCAAAATCAGCTGGACAAAC 190
|||||.|||||.|.||||||.|| |||| ||||..|.|||||.||..|||
BL05106 133 GATGCCGAACGGCGACAGCTTCA-CAATCTTCAGGAGCAGCTAGATCAAC 181
BSNT_01868 191 TCCAATAA 198
|...||||
BL05106 182 TATCATAA 189
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