Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01820 and BL05100

See DNA alignment / Visit BSNT_01820 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:19
# Commandline: needle
#    -asequence pep-align/BSNT_01820.1.5803.seq
#    -bsequence pep-align/BL05100___gerPE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01820-BL05100___gerPE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01820-BL05100___gerPE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01820
# 2: BL05100___gerPE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 134
# Identity:      58/134 (43.3%)
# Similarity:    75/134 (56.0%)
# Gaps:          27/134 (20.1%)
# Score: 277.5
# 
#
#=======================================

BSNT_01820         1 --------------------MFQVGDTNEIDMSVKVFAVQRSLSTFYNNE     30
                                         ..|:|||.|..:..||.||||.||.||.||
BL05100___ger      1 MILRTSKVKFLKVHSVGISSTLQIGDTEEQFLKSKVLAVQRYLSLFYGNE     50

BSNT_01820        31 GSFNKKEYQIFQQQAVKPIPETGVQSAFCHEVPAIYVRSIKIQGVSASSV     80
                     |||.:.::|:|:|...:.:|||||.|||.||:|.|.||:|||.|||:|||
BL05100___ger     51 GSFKQDDFQLFRQPIPQLLPETGVCSAFFHEIPFIRVRAIKINGVSSSSV    100

BSNT_01820        81 LHAGSASLIRGDARIKHIRQIQSPRSQSPAKNI-    113
                     ...||...|..|:|:||||::      .||:|. 
BL05100___ger    101 AQVGSTRRINADSRVKHIRKL------PPARNSQ    128


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