Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01505 and BL05083
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:59
# Commandline: needle
# -asequence pep-align/BSNT_01505___ssuD.1.5803.seq
# -bsequence pep-align/BL05083___ssuD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01505___ssuD-BL05083___ssuD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01505___ssuD-BL05083___ssuD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01505___ssuD
# 2: BL05083___ssuD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 380
# Identity: 293/380 (77.1%)
# Similarity: 330/380 (86.8%)
# Gaps: 8/380 ( 2.1%)
# Score: 1536.0
#
#
#=======================================
BSNT_01505___ 1 MEILWFIPTHGDARYLGSESDGRTADHLYFKQVAQAADRLGYTGVLLPTG 50
|:||||||||||.||||:.:.||.|||.||:|||||||||||||||||||
BL05083___ssu 1 MDILWFIPTHGDGRYLGTNTGGRAADHTYFQQVAQAADRLGYTGVLLPTG 50
BSNT_01505___ 51 RSCEDPWLTASALAGETKDLKFLVAVRPGLMQPSLAARMTSTLDRISDGR 100
|||||||:||:|||..||:|||||||||||||||:||||.||.||:::||
BL05083___ssu 51 RSCEDPWITAAALASVTKNLKFLVAVRPGLMQPSVAARMASTFDRLAEGR 100
BSNT_01505___ 101 LLINVVAGGDPYELAGDGLFISHDERYEATDEFLTVWRRLLQGETVSYEG 150
||||||||||||||||||||||||||||||:|||.:||.||:||||||.|
BL05083___ssu 101 LLINVVAGGDPYELAGDGLFISHDERYEATNEFLDIWRSLLKGETVSYSG 150
BSNT_01505___ 151 KHIKVENSNLLFPPQQEPHPPIYFGGSSQAGIEAAAKHTDVYLTWGEPPE 200
||:|.||..|||||.|:|||||||||||:||.|.||||.||||||||||.
BL05083___ssu 151 KHLKTENGRLLFPPAQQPHPPIYFGGSSKAGQETAAKHADVYLTWGEPPH 200
BSNT_01505___ 201 QVKEKIERVKKQAAKEGRSVRFGIRLHVIARETEQEAWEAAERLISHLDD 250
.|||||:.|||:|.||||:||||||||||.||||:|||:||:||||.|:|
BL05083___ssu 201 LVKEKIQSVKKKAEKEGRTVRFGIRLHVIVRETEKEAWQAADRLISRLED 250
BSNT_01505___ 251 DTIAKAQAALSRYDSSGQQRMAVLHQGDRTKLEISPNLWAGIGLVRGGAG 300
:|||.||.|:.|.|||||:||..||||:|:.|||||||||||||||||||
BL05083___ssu 251 ETIAAAQNAMKRMDSSGQKRMVQLHQGNRSNLEISPNLWAGIGLVRGGAG 300
BSNT_01505___ 301 TALVGDPQTIANRIAEYQALGIESFIFSGYPHLEEAYYFAELVFPLLPFE 350
|||||||:|:|:||.||..:|||||||||||||||||:|||.|||||||
BL05083___ssu 301 TALVGDPETVASRIKEYADIGIESFIFSGYPHLEEAYHFAEKVFPLLPF- 349
BSNT_01505___ 351 NDRTRKLQNK-RGEAVGNTYF---VKEKNA 376
|| |||:| .||.:||.:| .|||..
BL05083___ssu 350 --RT-KLQSKASGEVIGNDHFPSRQKEKTV 376
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