Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01149 and BL05064

See DNA alignment / Visit BSNT_01149 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:40
# Commandline: needle
#    -asequence pep-align/BSNT_01149___yerO.1.5803.seq
#    -bsequence pep-align/BL05064___yerO.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01149___yerO-BL05064___yerO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01149___yerO-BL05064___yerO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01149___yerO
# 2: BL05064___yerO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 287
# Identity:     129/287 (44.9%)
# Similarity:   199/287 (69.3%)
# Gaps:          10/287 ( 3.5%)
# Score: 659.0
# 
#
#=======================================

BSNT_01149___      1 MNEKKERIIKTSIRLFAKKGFAATTIQEIASECGISKGAFYLHFKSKEAL     50
                     |.||:|:|||..:.||||.|||:||||:||:||.||||||||||||||||
BL05064___yer      1 MTEKEEKIIKAGLHLFAKNGFASTTIQDIANECNISKGAFYLHFKSKEAL     50

BSNT_01149___     51 LLSACEYYIGMSMNKMKNIEEDLAGKPPKEVLKKQIGAQFEDFRDHKDFI    100
                     ||:..:|||...|..||.|::  ...||||..|:||..||.:.::|:|||
BL05064___yer     51 LLAIIKYYIDRMMENMKIIQQ--KNFPPKETFKEQIAYQFSESKEHRDFI     98

BSNT_01149___    101 VLLLTENIIPENQEIKQYFYKVTMETDKLYRNALLVSYGEGIERYVADLS    150
                     :::::|:.||||.:|::||..|:.:..:.|:|||..:||:.::.|::|||
BL05064___yer     99 LVMISEHSIPENSKIEEYFKNVSQKFHETYQNALSAAYGDIVKPYLSDLS    148

BSNT_01149___    151 IMARGIVHSYMNVMVFNDELNIDAEEISAFIIERLDDLVQGLSRSALNPI    200
                     ::.:|||.||.|:.:|| ||:||..|::.||:.|:||::.|:.::...||
BL05064___yer    149 VIVQGIVQSYQNLFIFN-ELDIDFYELADFIMRRIDDMIDGMVQNGEQPI    197

BSNT_01149___    201 VSKDIFN-----PMPAEKDQLLEDIQKVKENSTLPEDITVSLDVIEEELT    245
                     ::...::     ...|:|..:|.:::..|....|.|||.::||||||||.
BL05064___yer    198 LAGRTYSYYRNAGNTADKHTILRELEDAKRQPELSEDILITLDVIEEELR    247

BSNT_01149___    246 QDKPRKPIIKGMLSNLTGTNDKEVERLRALISVFISI    282
                     :|.||.|:::|||:||  .:...|:.|..:|:.|:..
BL05064___yer    248 KDSPRAPVLQGMLTNL--QHQDNVQHLYGMITRFLHS    282


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