Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03930 and BL05046

See DNA alignment / Visit BSNT_03930 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:56
# Commandline: needle
#    -asequence pep-align/BSNT_03930___yrhM.1.5803.seq
#    -bsequence pep-align/BL05046___yrhM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03930___yrhM-BL05046___yrhM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03930___yrhM-BL05046___yrhM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03930___yrhM
# 2: BL05046___yrhM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     212/286 (74.1%)
# Similarity:   254/286 (88.8%)
# Gaps:           1/286 ( 0.3%)
# Score: 1129.0
# 
#
#=======================================

BSNT_03930___      1 MDKRLQQLREEYKNVPIPKELDIIVEKALQQEPKKK-RIVMWPTSAAIAA     49
                     |||:|:|||:.|:|||||||||.:||.|||.:|||| |||:||.|..:||
BL05046___yrh      1 MDKKLEQLRKAYQNVPIPKELDQVVETALQHKPKKKRRIVVWPASTLVAA     50

BSNT_03930___     50 AILFTALVNINPDAAQAMSRIPVIGKIVKAITFIEIKEEKDQSSIDVKTP     99
                     |:|..|:|||||.||||||:||||||:||||||.|||::..:||||||||
BL05046___yrh     51 AVLLAAVVNINPGAAQAMSQIPVIGKVVKAITFTEIKQKDGESSIDVKTP    100

BSNT_03930___    100 ALSGLSNKELENSINQKYLKESQQLYKEFIQSTSKNKKGHLSIYSDYETV    149
                     |||||:|:||||.||:||:|||.|||:||::.||:|||||||||||||||
BL05046___yrh    101 ALSGLNNRELENGINEKYVKESHQLYREFMKETSRNKKGHLSIYSDYETV    150

BSNT_03930___    150 TDTPDLLSIRRNIEKTQASSYTQSRYITIDKKNDILLTLKSLFKDERYIK    199
                     |||.||:||||::|:|:|||||:.|||||||||::||||||||||:|||.
BL05046___yrh    151 TDTKDLISIRRSVERTEASSYTERRYITIDKKNEVLLTLKSLFKDDRYIT    200

BSNT_03930___    200 VISQNIREQMKQQMKEDPNKIYWLTDEDAEPFKTILPDQTFYITEDHKLV    249
                     .||:||:||||||||:||:||||:.||:.||||.|..||.|||||:||||
BL05046___yrh    201 AISENIKEQMKQQMKDDPDKIYWIGDEEVEPFKRIKADQNFYITENHKLV    250

BSNT_03930___    250 ISFDEYEVAPGYMGVTEFTIPTSVISNLLVGERYIR    285
                     ||||:|||||||||..||.|||..|||||:|:||||
BL05046___yrh    251 ISFDDYEVAPGYMGAVEFEIPTKAISNLLIGDRYIR    286


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