Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03929 and BL05045

See DNA alignment / Visit BSNT_03929 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:56
# Commandline: needle
#    -asequence pep-align/BSNT_03929___sigV.1.5803.seq
#    -bsequence pep-align/BL05045___sigV.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03929___sigV-BL05045___sigV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03929___sigV-BL05045___sigV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03929___sigV
# 2: BL05045___sigV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 166
# Identity:     137/166 (82.5%)
# Similarity:   152/166 (91.6%)
# Gaps:           1/166 ( 0.6%)
# Score: 707.0
# 
#
#=======================================

BSNT_03929___      1 MKKKQTTKALLVTCITDHKQDFYRLAFSYVKNQDDALDIVQESIKKALSS     50
                      .|||..:|.||.||||.|:||||||:||||||:||||||||||||||.|
BL05045___sig      1 -MKKQAARASLVACITDRKEDFYRLAYSYVKNQEDALDIVQESIKKALDS     49

BSNT_03929___     51 VETVRNPETIKSWFYKILVRTAIDFLRKQKKIRVMDDETIEFLSKGKEDH    100
                     |::||||:|||||||||||||||||||||||::||||:||||||:||||.
BL05045___sig     50 VDSVRNPDTIKSWFYKILVRTAIDFLRKQKKLKVMDDQTIEFLSQGKEDT     99

BSNT_03929___    101 YKDTDLYEALDELPYRYKTIIILRFFEDLKLEEIAEITGENTNTVKTRLY    150
                     |:||||:|||||||..|.|||:|||||||||||||||||||.||:|||||
BL05045___sig    100 YRDTDLHEALDELPQPYHTIIVLRFFEDLKLEEIAEITGENLNTIKTRLY    149

BSNT_03929___    151 RALKLMRIQLTKEDLS    166
                     |.||||||||||||||
BL05045___sig    150 RGLKLMRIQLTKEDLS    165


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