Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00768 and BL05039
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:24
# Commandline: needle
# -asequence pep-align/BSNT_00768___ydbI.1.5803.seq
# -bsequence pep-align/BL05039___ydbI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00768___ydbI-BL05039___ydbI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00768___ydbI-BL05039___ydbI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00768___ydbI
# 2: BL05039___ydbI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 351
# Identity: 254/351 (72.4%)
# Similarity: 300/351 (85.5%)
# Gaps: 6/351 ( 1.7%)
# Score: 1324.0
#
#
#=======================================
BSNT_00768___ 1 MAALVKFFQHPGVRRFSIFVVLTGVLYLFKSMINLILLTFIFTFLMDRLE 50
||||:||||||||||||:||||.||||||:||:|||||||||||||:|||
BL05039___ydb 1 MAALIKFFQHPGVRRFSVFVVLAGVLYLFRSMMNLILLTFIFTFLMNRLE 50
BSNT_00768___ 51 LVVRQFVSRFFRVSQRVVITFLYILLAVLLTVGGFVFYPVVAAQIQQLVK 100
.|:|.|::||.:||||::|:.||..||:.|::||.|:|||:..|||||:|
BL05039___ydb 51 NVIRGFLNRFIKVSQRLIISCLYAALAIALSIGGVVYYPVIVTQIQQLIK 100
BSNT_00768___ 101 QIKHIAYHPDSIPFFDEITSVFGDINISSYVKEGFNVVYTYLADISTFGL 150
|.||||.|||||||.|.||.:|||||::||:::|.|.:|||:.|||||||
BL05039___ydb 101 QGKHIASHPDSIPFLDMITGMFGDINLTSYLEKGLNFIYTYITDISTFGL 150
BSNT_00768___ 151 QVVMALILSMFFLFEKKRLSEFMAKFKTSKLRVFYEEIAFFGSKFARTFG 200
||||:|:||||.|.||.::...|.||||||:.:||||||:||.||.||||
BL05039___ydb 151 QVVMSLVLSMFLLIEKDKVMSLMDKFKTSKIAIFYEEIAYFGKKFTRTFG 200
BSNT_00768___ 201 KVLEAQFIIALVNCILTFIALWIMHFPQLFGLSIMVFFLGLIPVAGVVIS 250
||||||||||.:||.||.|||.||.|||||||::|||||||:||||||:|
BL05039___ydb 201 KVLEAQFIIATINCALTTIALAIMGFPQLFGLAVMVFFLGLVPVAGVVLS 250
BSNT_00768___ 251 LIPLSIIAYSTGGGMYVLYIVLVIFAIHAIETYFLNPKLMSAKTELPIFF 300
||||||||||.||..|::.:||||..:||||.||||||||||||||||||
BL05039___ydb 251 LIPLSIIAYSIGGIAYIVSLVLVIMIVHAIEAYFLNPKLMSAKTELPIFF 300
BSNT_00768___ 301 TFTVLIFSEHFFGIWGLIIGIPIFVFLLDILDVTNKE-DRSKGPRENSDK 349
||.||||||||.|||||||||||||||||||||||:| :|:.|.|:
BL05039___ydb 301 TFIVLIFSEHFIGIWGLIIGIPIFVFLLDILDVTNQEKNRTAGTRK---- 346
BSNT_00768___ 350 K 350
BL05039___ydb 346 - 346
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