Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00761 and BL05037
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:23
# Commandline: needle
# -asequence pep-align/BSNT_00761___ydbB.1.5803.seq
# -bsequence pep-align/BL05037___ydbB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00761___ydbB-BL05037___ydbB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00761___ydbB-BL05037___ydbB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00761___ydbB
# 2: BL05037___ydbB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 238
# Identity: 75/238 (31.5%)
# Similarity: 86/238 (36.1%)
# Gaps: 125/238 (52.5%)
# Score: 390.0
#
#
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BSNT_00761___ 1 MSKMQNLLAIANEVKEKHANFSISEVNDHCVRLAVFTGEYDWHHHPDSDE 50
|.:..|||.:..||.||||||.:|||||||:|:||..|||.||.||.|||
BL05037___ydb 1 MDRKTNLLELTKEVAEKHANFLVSEVNDHCMRIAVLEGEYVWHIHPGSDE 50
BSNT_00761___ 51 LFIVLEGELLIDFKDKETAVLKTNDSLLIPKGTVHRTRSYVRTVNLCVEH 100
|||||||||||||:|:.|.|||.|||||||||.:||||:.||:||||:|.
BL05037___ydb 51 LFIVLEGELLIDFQDRPTEVLKANDSLLIPKGVIHRTRADVRSVNLCIEK 100
BSNT_00761___ 101 KQAETVIIEEQPC------------------------------------- 113
..||||...|...
BL05037___ydb 101 TNAETVPFAEGNVLKLIRCKSAEQKLQAFSEAQAKWAPLQNVSGFIRQWG 150
BSNT_00761___ 113 -------------------------------------------------- 113
BL05037___ydb 151 GWMETEDGPEAVVLALWKSKHDYLNFMAEHHDEIYERTHQKGTFESINIT 200
BSNT_00761___ 113 -------------------------------------- 113
BL05037___ydb 201 LFEDPAEISETLQNNTPAPVPEWTVMGSGRLRDPHSLS 238
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