Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00709 and BL05029

See DNA alignment / Visit BSNT_00709 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence pep-align/BSNT_00709___ycsE.1.5803.seq
#    -bsequence pep-align/BL05029___ycsE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00709___ycsE-BL05029___ycsE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00709___ycsE-BL05029___ycsE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00709___ycsE
# 2: BL05029___ycsE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 251
# Identity:     209/251 (83.3%)
# Similarity:   237/251 (94.4%)
# Gaps:           2/251 ( 0.8%)
# Score: 1102.0
# 
#
#=======================================

BSNT_00709___      1 MSV-QREDVDIKLIAIDMDGTLLNDEQLISDENRKAIREAEDKGVYVVIS     49
                     ||| ||..:|:||:|:|||||||||||.|||||||||:|||:||||||:|
BL05029___ycs      1 MSVSQRNRIDVKLVALDMDGTLLNDEQTISDENRKAIKEAEEKGVYVVLS     50

BSNT_00709___     50 TGRTLMTCRELAESLKLSSFLITANGSEIWDSNFNLVERKLLHTDHIQMM     99
                     |||||||||||||||:||||||||||||||||:||||||:|||.||:|||
BL05029___ycs     51 TGRTLMTCRELAESLELSSFLITANGSEIWDSSFNLVERQLLHPDHVQMM    100

BSNT_00709___    100 WDLRNKHNTNFWASTVNKVWRGEFPENITDHEWLKFGFDIEDDDIRNEVL    149
                     |||||.|||:|||::|:|||||||||:|..:|||||||||.|||:||.||
BL05029___ycs    101 WDLRNLHNTDFWAASVDKVWRGEFPEDIQAYEWLKFGFDIPDDDVRNRVL    150

BSNT_00709___    150 QELRKNKELEITNSSPTNIEVNALGINKAAALAKVTEKLGITMENVMAMG    199
                     :||:||||||:||||||||||||:|||||||||||.|:||.|||:|||:|
BL05029___ycs    151 EELKKNKELEVTNSSPTNIEVNAIGINKAAALAKVCERLGFTMEHVMAVG    200

BSNT_00709___    200 DSLNDIAMIKEAGLGVAMGNAQDIVKETADYITDTNIEDGVAKAIRHWVL    249
                     ||||||||||||||||||||||:|||||||:|||:|||.|||||||||||
BL05029___ycs    201 DSLNDIAMIKEAGLGVAMGNAQEIVKETADWITDSNIEHGVAKAIRHWVL    250

BSNT_00709___    249 -    249
                      
BL05029___ycs    251 S    251


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