Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00895 and BL05016
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:28
# Commandline: needle
# -asequence pep-align/BSNT_00895.1.5803.seq
# -bsequence pep-align/BL05016___ydeG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00895-BL05016___ydeG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00895-BL05016___ydeG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00895
# 2: BL05016___ydeG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 429
# Identity: 233/429 (54.3%)
# Similarity: 281/429 (65.5%)
# Gaps: 107/429 (24.9%)
# Score: 1184.0
#
#
#=======================================
BSNT_00895 0 -------------------------------------------------- 0
BL05016___yde 1 MAGYSERTVESYIDSPDRLKRLYKRVLFIVSLSQIFGGAGLAAGITVGAL 50
BSNT_00895 1 -----------------------------------------------MIG 3
|:|
BL05016___yde 51 LAKQMLGTDAFSGVPSALFTLGSAGAAFGVGRLSQRYGRRTGLTAGFMVG 100
BSNT_00895 4 GLGAIGVIMAAIINSIFLLFIALLIYGAGTATNLQARYAGTDLANHKQRA 53
|:|||||:.||:||||.|||::||||||||||||||||||||||:.||||
BL05016___yde 101 GIGAIGVVAAAVINSIILLFVSLLIYGAGTATNLQARYAGTDLADKKQRA 150
BSNT_00895 54 TAVSITMVFTTFGAVAGPSLVNVMGDFALSIGVPSLAGPFILAAAAYMLA 103
.|:|:|||.|||||||||:||:|||.||..||||.|||||||:|||::||
BL05016___yde 151 KAISVTMVMTTFGAVAGPNLVDVMGKFASIIGVPPLAGPFILSAAAFILA 200
BSNT_00895 104 GVVLFIMLRPDPLVIARTIEAANEEP--GDKGHLAATEHTENKKGIIVGA 151
|:||:|:||||||.||:.||...:|. .|:...|.. ::::|||.:||
BL05016___yde 201 GLVLYILLRPDPLEIAKKIETYRQENKLADESKSAGA--SDDQKGITIGA 248
BSNT_00895 152 TVMVLTQIVMVAIMTMTPVHMRHHGHDLGAVGLVIGFHIGAMYLPSLVTG 201
.||||||||||||||||||||:||||.||.||:|||||||:|||||||||
BL05016___yde 249 AVMVLTQIVMVAIMTMTPVHMQHHGHSLGDVGIVIGFHIGSMYLPSLVTG 298
BSNT_00895 202 VLVDRLGRTAMAISSGTTLLLAGVIAAFAPGDSMVLLVIALSLLGLGWNF 251
:|||::||||::|:||.||||||.:||.||.||:|||::|||||||||||
BL05016___yde 299 ILVDKIGRTAISIASGVTLLLAGAVAALAPSDSLVLLIVALSLLGLGWNF 348
BSNT_00895 252 GLISGTALIVDSTDSATRAKTQGTVDVLIALSGAAGGALSGMIVAGSSYL 301
|||||||.|:|||:.:||||.|||:||||||:||:|||||||:||.|||.
BL05016___yde 349 GLISGTAQIIDSTEPSTRAKVQGTLDVLIALAGASGGALSGMVVAHSSYA 398
BSNT_00895 302 ALSFTGGMLSLLLIPVVVWFRGR------ 324
.||..||:|||.|||.|:|.|.:
BL05016___yde 399 VLSLAGGLLSLALIPAVIWPRRKTNTQKG 427
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