Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00895 and BL05016
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:28
# Commandline: needle
# -asequence dna-align/BSNT_00895.1.5803.seq
# -bsequence dna-align/BL05016___ydeG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00895-BL05016___ydeG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00895-BL05016___ydeG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00895
# 2: BL05016___ydeG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1329
# Identity: 669/1329 (50.3%)
# Similarity: 669/1329 (50.3%)
# Gaps: 399/1329 (30.0%)
# Score: 2051.0
#
#
#=======================================
BSNT_00895 0 -------------------------------------------------- 0
BL05016___yde 1 GTGGCGGGGTATTCTGAACGAACGGTTGAGAGTTACATAGATTCTCCGGA 50
BSNT_00895 0 -------------------------------------------------- 0
BL05016___yde 51 TCGATTAAAGAGATTGTACAAAAGAGTATTATTCATCGTGAGTCTGTCGC 100
BSNT_00895 0 -------------------------------------------------- 0
BL05016___yde 101 AGATTTTCGGCGGTGCGGGGCTGGCTGCCGGGATTACGGTAGGCGCCCTG 150
BSNT_00895 0 -------------------------------------------------- 0
BL05016___yde 151 TTAGCAAAGCAAATGCTTGGGACGGATGCGTTTTCAGGAGTCCCTTCTGC 200
BSNT_00895 0 -------------------------------------------------- 0
BL05016___yde 201 CTTATTTACTTTAGGATCGGCAGGAGCCGCTTTCGGCGTCGGGAGACTTT 250
BSNT_00895 1 -----------------------------------------ATGATTGGC 9
|||.|.|||
BL05016___yde 251 CTCAGCGTTACGGGCGCCGCACGGGCTTAACCGCCGGCTTTATGGTCGGC 300
BSNT_00895 10 GGACTTGGAGCAATAGGCGTTATTATGGCAGCAATCATAAATAGTATTTT 59
||..|.||.|||||.||.||..||...||.||..|.||.||.||.||..|
BL05016___yde 301 GGGATCGGCGCAATCGGGGTCGTTGCTGCGGCCGTGATCAACAGCATCAT 350
BSNT_00895 60 CTTGTTATTTATTGCGTTGCTTATTTACGGTGCAGGTACAGCCACTAATT 109
.|||||.||..||.|..|||||||||||||.||.||.|||||.||.||.|
BL05016___yde 351 ATTGTTGTTCGTTTCCCTGCTTATTTACGGAGCGGGCACAGCGACAAACT 400
BSNT_00895 110 TACAGGCGCGTTATGCTGGTACAGACTTAGCAAATCATAAGCAGCGAGCG 159
|.||||||||.|||||.||.||.|||||.||..||.|.||||||||.||.
BL05016___yde 401 TGCAGGCGCGGTATGCCGGCACTGACTTGGCTGATAAAAAGCAGCGGGCT 450
BSNT_00895 160 ACTGCTGTTAGTATTACGATGGTTTTTACTACATTTGGCGCAGTGGCAGG 209
|..||..|.||..|.||.|||||..|.||.||||||||.||.||.||.||
BL05016___yde 451 AAAGCGATCAGCGTCACAATGGTGATGACAACATTTGGAGCGGTTGCGGG 500
BSNT_00895 210 TCCAAGCTTAGTGAATGTGATGGGGGATTTCGC-TCTTTCTATTGGTGTT 258
.||.|..||.|||.||||.||||||.|.||.|| ||..|| ||.||.|||
BL05016___yde 501 CCCCAATTTGGTGGATGTCATGGGGAAATTTGCTTCGATC-ATCGGCGTT 549
BSNT_00895 259 CCATCACTTGCTGGCCCTTTCATTTTAGCCGCAGCAGCATATATGTTAGC 308
||..|||||||.||.||.||.||||||.|.||.|||||.|.|||..|.||
BL05016___yde 550 CCGCCACTTGCGGGACCGTTTATTTTATCGGCGGCAGCTTTTATTCTGGC 599
BSNT_00895 309 AGGTGTGGTCCTTTTCATTATGCTTCGTCCAGATCCATT----------- 347
|||..|.||.||||..|||.|||||||.||.|||||.||
BL05016___yde 600 AGGGCTTGTGCTTTATATTTTGCTTCGGCCGGATCCGTTGGAGATCGCCA 649
BSNT_00895 348 -----------AGTTATAG-CAAGAACAATAGA--AGC-GGCAAAT-GAA 381
|..||||| |||||| ||||.| ||| |.|.||| |||
BL05016___yde 650 AAAAAATCGAAACCTATAGACAAGAA-AATAAATTAGCAGACGAATCGAA 698
BSNT_00895 382 G--AGCCTGGTGATAAAGGACATTTGGCGGCAACTGAGCATACAGAAAAC 429
| .||| ||||.| ..|||| ||.|
BL05016___yde 699 GTCTGCC-GGTGCT-TCGGAC--------------GATC----------- 721
BSNT_00895 430 AAAAAAGGGATAATCGTTGGGGCAACGGTTATGGTTCTTACCCAAATAGT 479
||||.|||||.|...||||.||..|.||||||||.|||||||||||.||
BL05016___yde 722 -AAAAGGGGATTACAATTGGTGCCGCTGTTATGGTGCTTACCCAAATTGT 770
BSNT_00895 480 AATGGTAGCTATTATGACAATGACACCGGTTCATATG-AGACATCATGGG 528
.|||||.||.||||||||.|||||.||.||||||||| || ||.||.||.
BL05016___yde 771 GATGGTTGCGATTATGACCATGACGCCCGTTCATATGCAG-CACCACGGA 819
BSNT_00895 529 CATGACTTGGGGGCAGTAGGGCTTGTTATTGGTTTTCATATAGGTGCTAT 578
||...||||||.|..||.|||.|.||.||.|||||||||||.|||.|.||
BL05016___yde 820 CACAGCTTGGGAGATGTCGGGATCGTGATAGGTTTTCATATCGGTTCAAT 869
BSNT_00895 579 GTATCTCCCTTCACTGGTTACAGGTGTTCTTGTAGATAGGTTGGGACGTA 628
||||||.||.|||||.||.|||||..|||||||.||||...|.||.||.|
BL05016___yde 870 GTATCTTCCGTCACTTGTCACAGGGATTCTTGTTGATAAAATTGGCCGGA 919
BSNT_00895 629 CCGCAAT-GGCTATTTCCTCTGGAACAACGTTGCTTTTGGCAGGTGTAAT 677
|.||.|| .|| ||..||||.||....||..||||..|.||.||||.|.|
BL05016___yde 920 CAGCCATAAGC-ATCGCCTCAGGGGTGACCCTGCTGCTCGCTGGTGCAGT 968
BSNT_00895 678 AGCAGCATTTGCTCCGGGAGATTCTATGGTTCTTCTCG-TCATTGCTCTT 726
.||.||..|.|||||..|.|||||..|.||| ||.|.| ||.||||.|||
BL05016___yde 969 GGCGGCGCTGGCTCCCAGCGATTCGCTCGTT-TTATTGATCGTTGCCCTT 1017
BSNT_00895 727 TCTTTACTCGGATTAGGGTGGAATTTTGGTTTGATAAGCGGGACTGCCCT 776
||..|.||.|||||.||.|||||.|||||.||.||.|||||.|||||.|.
BL05016___yde 1018 TCGCTGCTTGGATTGGGATGGAACTTTGGATTAATCAGCGGAACTGCACA 1067
BSNT_00895 777 TATTGTAGATTCAACTGATAGTGCC----ACACGAGCTAAAACGCAGGGG 822
.|||.|.|||||.||.|| ||| |||||.||.|||..||||||.
BL05016___yde 1068 AATTATCGATTCGACCGA----GCCTTCAACACGTGCGAAAGTGCAGGGA 1113
BSNT_00895 823 ACAGTGGATGTTCTGATTGCGTTGTCAGGAGCTGCTGGCGGAGCATTATC 872
||..|.||||||.||||.||.|||.|.||.|||.|.|||||.||..|.||
BL05016___yde 1114 ACGCTTGATGTTTTGATCGCATTGGCGGGGGCTTCCGGCGGGGCTCTTTC 1163
BSNT_00895 873 TGGAATGATTGTGGCAGGGTCAAGTTACCTCGCATTATCATTTACTGGAG 922
.||||||.||||.||....|||||.||...||..|||||.||..|.||.|
BL05016___yde 1164 CGGAATGGTTGTCGCTCATTCAAGCTATGCCGTGTTATCCTTGGCGGGCG 1213
BSNT_00895 923 GGATGTTGTCCTTATTACTCATTCCAGTGGTGGTATGGTTTAGGGGCCGC 972
||.||||.|||||....||.|||||||..||..|.| ||||||
BL05016___yde 1214 GGCTGTTATCCTTGGCTCTGATTCCAGCCGTCATTT--------GGCCGC 1255
BSNT_00895 973 TAA-------------------------- 975
.||
BL05016___yde 1256 GAAGAAAAACAAATACTCAAAAAGGGTAG 1284
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