Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00202 and BL05008

See DNA alignment / Visit BSNT_00202 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:51
# Commandline: needle
#    -asequence pep-align/BSNT_00202___rplK.1.5803.seq
#    -bsequence pep-align/BL05008___rplK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00202___rplK-BL05008___rplK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00202___rplK-BL05008___rplK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00202___rplK
# 2: BL05008___rplK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 141
# Identity:     140/141 (99.3%)
# Similarity:   141/141 (100.0%)
# Gaps:           0/141 ( 0.0%)
# Score: 699.0
# 
#
#=======================================

BSNT_00202___      1 MAKKVVKVVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTADQA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||:|||
BL05008___rpl      1 MAKKVVKVVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTSDQA     50

BSNT_00202___     51 GLIIPVEISVYEDRSFTFITKTPPAAVLLKKAAGIESGSGEPNRNKVATV    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL05008___rpl     51 GLIIPVEISVYEDRSFTFITKTPPAAVLLKKAAGIESGSGEPNRNKVATV    100

BSNT_00202___    101 KRDKVREIAETKMPDLNAADVEAAMRMVEGTARSMGIVIED    141
                     |||||||||||||||||||||||||||||||||||||||||
BL05008___rpl    101 KRDKVREIAETKMPDLNAADVEAAMRMVEGTARSMGIVIED    141


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