Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00202 and BL05008
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:51
# Commandline: needle
# -asequence dna-align/BSNT_00202___rplK.1.5803.seq
# -bsequence dna-align/BL05008___rplK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00202___rplK-BL05008___rplK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00202___rplK-BL05008___rplK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00202___rplK
# 2: BL05008___rplK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 426
# Identity: 393/426 (92.3%)
# Similarity: 393/426 (92.3%)
# Gaps: 0/426 ( 0.0%)
# Score: 1833.0
#
#
#=======================================
BSNT_00202___ 1 GTGGCTAAAAAAGTAGTTAAAGTTGTAAAATTGCAAATTCCTGCTGGAAA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BL05008___rpl 1 GTGGCTAAAAAAGTAGTTAAAGTTGTAAAATTGCAAATTCCTGCTGGAAA 50
BSNT_00202___ 51 AGCTAACCCAGCACCACCAGTTGGACCTGCACTTGGTCAAGCCGGTGTTA 100
|||.||.|||||.||.||||||||.|||||..|.||||||||||||||||
BL05008___rpl 51 AGCGAATCCAGCTCCGCCAGTTGGTCCTGCGTTAGGTCAAGCCGGTGTTA 100
BSNT_00202___ 101 ACATCATGGGATTCTGTAAGGAGTTTAACGCTCGTACAGCTGACCAAGCT 150
||||||||||||||||||||||||||||||||||||||.|||||||||||
BL05008___rpl 101 ACATCATGGGATTCTGTAAGGAGTTTAACGCTCGTACATCTGACCAAGCT 150
BSNT_00202___ 151 GGTTTAATCATTCCTGTTGAAATTTCGGTTTACGAAGACCGTTCATTTAC 200
|||.|.|||||||||||.||||||||||||||||||||||||||||||||
BL05008___rpl 151 GGTCTGATCATTCCTGTAGAAATTTCGGTTTACGAAGACCGTTCATTTAC 200
BSNT_00202___ 201 ATTTATTACAAAAACTCCACCTGCTGCAGTATTGCTTAAAAAAGCAGCTG 250
||||||.|||||||||||.||||||||.|||||||||||||||||.||||
BL05008___rpl 201 ATTTATCACAAAAACTCCGCCTGCTGCTGTATTGCTTAAAAAAGCGGCTG 250
BSNT_00202___ 251 GAATTGAGTCTGGTTCTGGTGAACCAAACCGTAATAAAGTGGCAACCGTT 300
||||||||||.|||||||||||.||.||||||||||||||.|||||||||
BL05008___rpl 251 GAATTGAGTCAGGTTCTGGTGAGCCTAACCGTAATAAAGTCGCAACCGTT 300
BSNT_00202___ 301 AAGCGCGATAAAGTACGCGAAATCGCTGAAACGAAAATGCCTGACTTAAA 350
||.||||||||||||||.||||||||.|||||.|||||||||||||||||
BL05008___rpl 301 AAACGCGATAAAGTACGTGAAATCGCCGAAACAAAAATGCCTGACTTAAA 350
BSNT_00202___ 351 CGCAGCAGACGTTGAAGCGGCAATGCGCATGGTTGAAGGTACTGCCCGCA 400
.||.|||||.|||||||||||.|||||.|||||||||||.||||||||||
BL05008___rpl 351 TGCGGCAGATGTTGAAGCGGCTATGCGTATGGTTGAAGGAACTGCCCGCA 400
BSNT_00202___ 401 GTATGGGTATTGTAATCGAGGATTAA 426
|||||||||||||.|||||.||.|||
BL05008___rpl 401 GTATGGGTATTGTGATCGAAGACTAA 426
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