Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00137 and BL05005

See DNA alignment / Visit BSNT_00137 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:49
# Commandline: needle
#    -asequence pep-align/BSNT_00137___yazB.1.5803.seq
#    -bsequence pep-align/BL05005___yazB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00137___yazB-BL05005___yazB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00137___yazB-BL05005___yazB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00137___yazB
# 2: BL05005___yazB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 69
# Identity:      50/69 (72.5%)
# Similarity:    64/69 (92.8%)
# Gaps:           0/69 ( 0.0%)
# Score: 276.0
# 
#
#=======================================

BSNT_00137___      1 MEAEIWGRRIRAFRKLKGYTQEGFAKALGISVSILGEIERGNRLPSAAII     50
                     ||||||||||||:||||||||||||||||||||:|||:|||||:|:.:::
BL05005___yaz      1 MEAEIWGRRIRAYRKLKGYTQEGFAKALGISVSVLGEVERGNRMPTESML     50

BSNT_00137___     51 QDAADVLNISADELAPPEK     69
                     :|.|:.|||:.:||:|.|:
BL05005___yaz     51 RDVANTLNITVEELSPSEE     69


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.