Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00137 and BL05005
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:49
# Commandline: needle
# -asequence dna-align/BSNT_00137___yazB.1.5803.seq
# -bsequence dna-align/BL05005___yazB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00137___yazB-BL05005___yazB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00137___yazB-BL05005___yazB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00137___yazB
# 2: BL05005___yazB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 217
# Identity: 169/217 (77.9%)
# Similarity: 169/217 (77.9%)
# Gaps: 14/217 ( 6.5%)
# Score: 645.0
#
#
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BSNT_00137___ 1 ATGGAAGCAGAAATCTGGGGTAGACGAATTCGTGCAT-TCAGAAAGCTGA 49
||||||||||||||||||||||||||||||||||||| || |||||||||
BL05005___yaz 1 ATGGAAGCAGAAATCTGGGGTAGACGAATTCGTGCATATC-GAAAGCTGA 49
BSNT_00137___ 50 AAGGTTATACTCAAGAAGGATTTGCAAAAGCATTAGGTATATCAGTTTCT 99
|.|||||||||||||||||.|||||.||||||||.||||||||.||||||
BL05005___yaz 50 AGGGTTATACTCAAGAAGGGTTTGCCAAAGCATTGGGTATATCCGTTTCT 99
BSNT_00137___ 100 ATTCTCGGCGAAATTGAACGCGGAAACCGATTGCCGTC----AGC-TGCC 144
.|.||.||.|||.|.||||||||.||.||..|||||.| ||| |||
BL05005___yaz 100 GTGCTTGGTGAAGTAGAACGCGGGAATCGTATGCCGACGGAGAGCATGC- 148
BSNT_00137___ 145 ATCATTCA-AGATGCAGCAGATGTTTTAAATATAAGTGCGGACGAATTGG 193
||| .||||.|||..||..|||||||||||..|.|||.|||.|..
BL05005___yaz 149 -----TCAGGGATGTAGCCAATACTTTAAATATAACAGTGGAGGAACTAT 193
BSNT_00137___ 194 CGCCGCCAGAAAAATAG 210
|.||..|||||.||||.
BL05005___yaz 194 CTCCATCAGAAGAATAA 210
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