Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00137 and BL05005

See Amino acid alignment / Visit BSNT_00137 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:49
# Commandline: needle
#    -asequence dna-align/BSNT_00137___yazB.1.5803.seq
#    -bsequence dna-align/BL05005___yazB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00137___yazB-BL05005___yazB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00137___yazB-BL05005___yazB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00137___yazB
# 2: BL05005___yazB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 217
# Identity:     169/217 (77.9%)
# Similarity:   169/217 (77.9%)
# Gaps:          14/217 ( 6.5%)
# Score: 645.0
# 
#
#=======================================

BSNT_00137___      1 ATGGAAGCAGAAATCTGGGGTAGACGAATTCGTGCAT-TCAGAAAGCTGA     49
                     ||||||||||||||||||||||||||||||||||||| || |||||||||
BL05005___yaz      1 ATGGAAGCAGAAATCTGGGGTAGACGAATTCGTGCATATC-GAAAGCTGA     49

BSNT_00137___     50 AAGGTTATACTCAAGAAGGATTTGCAAAAGCATTAGGTATATCAGTTTCT     99
                     |.|||||||||||||||||.|||||.||||||||.||||||||.||||||
BL05005___yaz     50 AGGGTTATACTCAAGAAGGGTTTGCCAAAGCATTGGGTATATCCGTTTCT     99

BSNT_00137___    100 ATTCTCGGCGAAATTGAACGCGGAAACCGATTGCCGTC----AGC-TGCC    144
                     .|.||.||.|||.|.||||||||.||.||..|||||.|    ||| ||| 
BL05005___yaz    100 GTGCTTGGTGAAGTAGAACGCGGGAATCGTATGCCGACGGAGAGCATGC-    148

BSNT_00137___    145 ATCATTCA-AGATGCAGCAGATGTTTTAAATATAAGTGCGGACGAATTGG    193
                          ||| .||||.|||..||..|||||||||||..|.|||.|||.|..
BL05005___yaz    149 -----TCAGGGATGTAGCCAATACTTTAAATATAACAGTGGAGGAACTAT    193

BSNT_00137___    194 CGCCGCCAGAAAAATAG    210
                     |.||..|||||.||||.
BL05005___yaz    194 CTCCATCAGAAGAATAA    210


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