Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00062 and BL05002

See DNA alignment / Visit BSNT_00062 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:43
# Commandline: needle
#    -asequence pep-align/BSNT_00062___yaaR.1.5803.seq
#    -bsequence pep-align/BL05002___yaaR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00062___yaaR-BL05002___yaaR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00062___yaaR-BL05002___yaaR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00062___yaaR
# 2: BL05002___yaaR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 146
# Identity:      99/146 (67.8%)
# Similarity:   127/146 (87.0%)
# Gaps:           0/146 ( 0.0%)
# Score: 522.0
# 
#
#=======================================

BSNT_00062___      1 MKINKDIRTFIDNKQIPSVKTSEITASFKTSMENQSSKMKLDQLTRLLSD     50
                     |||::::||.|:.:|.|..:...::||||..|..||.|::::|||.||:|
BL05002___yaa      1 MKISQELRTMIEKQQTPPARGENVSASFKEKMNIQSGKLRVEQLTMLLTD     50

BSNT_00062___     51 IEAFGKRLTKSRNFKDLARFKGLVKRFVKEAVDSGLSHETSKSFDLYGNS    100
                     ||||||||:||||||||||||||:||||||.|::||:.|.|:||||||||
BL05002___yaa     51 IEAFGKRLSKSRNFKDLARFKGLIKRFVKETVENGLTVENSRSFDLYGNS    100

BSNT_00062___    101 RTLGLVKEIDDKLIQLTEEMMDQEKPAIDLLERIGEIKGLLINLYT    146
                     |||.:|||:|:||:||||::|||||.:|:|||||||||||||||||
BL05002___yaa    101 RTLSIVKELDEKLVQLTEDLMDQEKSSIELLERIGEIKGLLINLYT    146


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