Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00056 and BL05001

See DNA alignment / Visit BSNT_00056 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:42
# Commandline: needle
#    -asequence pep-align/BSNT_00056___csfB.1.5803.seq
#    -bsequence pep-align/BL05001___csfB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00056___csfB-BL05001___csfB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00056___csfB-BL05001___csfB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00056___csfB
# 2: BL05001___csfB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 66
# Identity:      42/66 (63.6%)
# Similarity:    52/66 (78.8%)
# Gaps:           5/66 ( 7.6%)
# Score: 241.5
# 
#
#=======================================

BSNT_00056___      1 MDETVKLNH--TCVICDQEKNRGIHLYTKFICLDCERKVISTSTSDPDYA     48
                        ..|.||  ||:||::.|..||||||||:|.|||:|::|||||||:|:
BL05001___csf      1 ---MSKSNHGETCIICEENKTEGIHLYTKFLCSDCEKKIVSTSTSDPEYS     47

BSNT_00056___     49 FYVKKLKSIHTPPLYS     64
                     .|||||||:.||||||
BL05001___csf     48 DYVKKLKSLRTPPLYS     63


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