Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00056 and BL05001
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:42
# Commandline: needle
# -asequence dna-align/BSNT_00056___csfB.1.5803.seq
# -bsequence dna-align/BL05001___csfB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00056___csfB-BL05001___csfB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00056___csfB-BL05001___csfB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00056___csfB
# 2: BL05001___csfB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 206
# Identity: 145/206 (70.4%)
# Similarity: 145/206 (70.4%)
# Gaps: 25/206 (12.1%)
# Score: 483.0
#
#
#=======================================
BSNT_00056___ 1 ATGGACGAAACAGTTAAACT-TAATCAT------ACATGTGTGATTTGTG 43
||| ||| ||.| ||||||| ||.|||.|.|||||.|
BL05001___csf 1 ATG--------AGT--AAGTCTAATCATGGGGAAACGTGTATCATTTGCG 40
BSNT_00056___ 44 ATCAAGAGAAGAATAG-AGGCATTCATCTTTATACGAAATTCATATGCTT 92
|..||.|.|| ||..| |||.||||||||||||||||||||..||||.|.
BL05001___csf 41 AGGAAAATAA-AACCGAAGGAATTCATCTTTATACGAAATTTTTATGTTC 89
BSNT_00056___ 93 AGATTGTGAGAGAAAAGTAATT---TCTACATCAACTTCTGATCCTGACT 139
.|||||||||| ||||| ||| |||||||||||.||.||.||.||.|
BL05001___csf 90 GGATTGTGAGA-AAAAG--ATTGTATCTACATCAACATCAGACCCCGAAT 136
BSNT_00056___ 140 ATGCGTTTTACGTAAAAAAACTAAAGAGCATTCATACACCGCCATTATAT 189
|..|...|||.||.||||||.|||||||..|.|.|||.||||||||||||
BL05001___csf 137 ACTCTGATTATGTCAAAAAATTAAAGAGTCTCCGTACGCCGCCATTATAT 186
BSNT_00056___ 190 TCATAG 195
||.|||
BL05001___csf 187 TCTTAG 192
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