Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04060 and BL04043

See DNA alignment / Visit BSNT_04060 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:06
# Commandline: needle
#    -asequence pep-align/BSNT_04060___rplU.1.5803.seq
#    -bsequence pep-align/BL04043___rplU.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04060___rplU-BL04043___rplU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04060___rplU-BL04043___rplU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04060___rplU
# 2: BL04043___rplU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 102
# Identity:      92/102 (90.2%)
# Similarity:    99/102 (97.1%)
# Gaps:           0/102 ( 0.0%)
# Score: 479.0
# 
#
#=======================================

BSNT_04060___      1 MYAIIKTGGKQIKVEEGQTVYIEKLAAEAGETVTFEDVLFVGGDNVKVGN     50
                     |||||:|||||||||||||||:|||||||||||||::||||||:|||||:
BL04043___rpl      1 MYAIIQTGGKQIKVEEGQTVYVEKLAAEAGETVTFDNVLFVGGENVKVGS     50

BSNT_04060___     51 PTVEGATVTAKVEKQGRAKKITVFRYKPKKNVHKKQGHRQPYTKVTIEKI    100
                     |||||||||.||||||||||||||:||||||.|||||||||||||.||||
BL04043___rpl     51 PTVEGATVTGKVEKQGRAKKITVFKYKPKKNQHKKQGHRQPYTKVVIEKI    100

BSNT_04060___    101 NA    102
                     ||
BL04043___rpl    101 NA    102


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