Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03256 and BL04042

See DNA alignment / Visit BSNT_03256 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:55
# Commandline: needle
#    -asequence pep-align/BSNT_03256.1.5803.seq
#    -bsequence pep-align/BL04042___ypiP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03256-BL04042___ypiP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03256-BL04042___ypiP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03256
# 2: BL04042___ypiP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 257
# Identity:     130/257 (50.6%)
# Similarity:   163/257 (63.4%)
# Gaps:          49/257 (19.1%)
# Score: 694.0
# 
#
#=======================================

BSNT_03256         1 MITTSYRPSEHTIKTAKQLSKELNMPYCGRNKQTVEHLLKSAERDLLVVG     50
                                                                    :||
BL04042___ypi      1 -----------------------------------------------MVG      3

BSNT_03256        51 KERFELYTKQGAKFFFHPNTAMFRAKRFLQGEQEPMLRAAGLSEGDAFLD    100
                     |||||||..:|.|||||||:|||||||.|:||.:|.:.||.:..||..||
BL04042___ypi      4 KERFELYHSEGEKFFFHPNSAMFRAKRMLRGEPDPFVEAAQVEPGDKVLD     53

BSNT_03256       101 CTLGLGSDAIIASMAVGETGSVVGIEKNHLVSVLVRMGLHSWETGIEELQ    150
                     |||||||||||||:|.||.|.|.||||:.|::.||..||.|||||::.|.
BL04042___ypi     54 CTLGLGSDAIIASLAAGEQGEVRGIEKSPLLAFLVEAGLQSWETGLDVLD    103

BSNT_03256       151 AAMRRIQVKNGDCLEYIKQLPDNSVDVVYFDPMFHEPVETSDGIAPLRDL    200
                     .||:||:|.:||.::|:.:|.|.|.|:|||||||.:.::.||||||||..
BL04042___ypi    104 QAMKRIRVHSGDSIDYLLELDDASADIVYFDPMFDDGIKESDGIAPLRKW    153

BSNT_03256       201 AEDSVLHEGCINEAVRVARKSVVLKDHWKSPRFEQFGFNVMKRKTALFHY    250
                     |......:|.::||:|||||.|||||||||||||::||:|.|||||||||
BL04042___ypi    154 AHSEFTLDGALHEALRVARKRVVLKDHWKSPRFEKYGFSVKKRKTALFHY    203

BSNT_03256       251 GVIQTSP    257
                     ||::.  
BL04042___ypi    204 GVLEK--    208


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