Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03256 and BL04042
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:55
# Commandline: needle
# -asequence dna-align/BSNT_03256.1.5803.seq
# -bsequence dna-align/BL04042___ypiP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03256-BL04042___ypiP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03256-BL04042___ypiP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03256
# 2: BL04042___ypiP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 805
# Identity: 428/805 (53.2%)
# Similarity: 428/805 (53.2%)
# Gaps: 209/805 (26.0%)
# Score: 1234.5
#
#
#=======================================
BSNT_03256 1 ATGATAACAACAAGCTATAGACCGTCTGAACACACCATAAAAACTGCAAA 50
BL04042___ypi 0 -------------------------------------------------- 0
BSNT_03256 51 GCAGCTTTCTAAAGAGCTAAATATGCCATACTGCGGACGGAATAAACAAA 100
BL04042___ypi 0 -------------------------------------------------- 0
BSNT_03256 101 CGGTTGAACACCTGTTGAAGTCAGCTGAACGTGATTTGCTAGTGGTCGGC 150
|||||.||.
BL04042___ypi 1 -----------------------------------------GTGGTTGGA 9
BSNT_03256 151 AAAGAGCGGTTTGAGCTGTATACGAAACAAGGTGCCAAATTCTTTTTTCA 200
||||||||.||||||||||||.....|.||||||..||.||||||||.||
BL04042___ypi 10 AAAGAGCGCTTTGAGCTGTATCATTCAGAAGGTGAAAAGTTCTTTTTCCA 59
BSNT_03256 201 TCCAAATACAGCGATGTTCAGAGCCAAACGCTTCTTACAG-GGAGAGCAA 249
|||.||..|.|||||||||.|.|||||.||..|.||| || ||.||.|..
BL04042___ypi 60 TCCGAACTCTGCGATGTTCCGGGCCAAGCGTATGTTA-AGAGGCGAACCG 108
BSNT_03256 250 GAGCCTATGCTTCGGGCTGCCG--GCT----TATCTGAA---GGGGA--- 287
||.|||.| ||.|| ||| .|..|||| |||||
BL04042___ypi 109 GACCCTTT---------TGTCGAAGCTGCACAAGTTGAACCGGGGGACAA 149
BSNT_03256 288 --TGCGTTTTTAGATTGCACACTCGGGCTGGGGTCAGATGCCATTATCGC 335
||| |.||||||||.|||||.||.||.|||||.||.||.||.||
BL04042___ypi 150 GGTGC-----TCGATTGCACGCTCGGTCTTGGATCAGACGCGATCATTGC 194
BSNT_03256 336 AAGTATGGCAGTAGGCGAA-ACGG----GTTCTGTTGTTGGGATTGAAAA 380
.||..|.||.|.||||||| |.|| ||.| ..||.||||||||
BL04042___ypi 195 GAGCCTTGCCGCAGGCGAACAAGGCGAAGTGC-----GCGGAATTGAAAA 239
BSNT_03256 381 AAACCATCTTGTGTCTGTTTTAGT-GAGGATGGGGCTGCATTCATGGGAA 429
||.||..|||.|..||.||.|.|| |||| .||||||.||.||.|||||.
BL04042___ypi 240 AAGCCCGCTTCTCGCTTTTCTTGTCGAGG-CGGGGCTTCAATCGTGGGAG 288
BSNT_03256 430 ACGGGTATAGAAG---AGCTTCAAGCTGCGATGAGAAGAATCCAGGTGAA 476
||.||..|.||.| .|..||| .|||||||.|||.||.|.|||..|
BL04042___ypi 289 ACCGGCCTTGACGTTTTGGATCA---GGCGATGAAAAGGATTCGGGTTCA 335
BSNT_03256 477 GAATGGTGATTGCTTAGAATACATCAAGCAGCTTCCTGACAACTCTGTTG 526
....||.||..||.|.||.|||.|...|.|.|||..|||....||.|..|
BL04042___ypi 336 TTCAGGCGACAGCATTGATTACCTGCTGGAACTTGATGATGCTTCAGCAG 385
BSNT_03256 527 ATGTGGTTTATTTCGATCCAATGTTTCATGAACCTG----TAGAGACCTC 572
||.|.||.||.|||||.||.||||||.|||| || .|.||| .||
BL04042___ypi 386 ATATCGTCTACTTCGACCCGATGTTTGATGA---TGGAATCAAAGA-ATC 431
BSNT_03256 573 TGACGGCATCGCGCCTTTACGTGATTTGGCAGAGGATTCCG---TTTTGC 619
.|||||||||||.||||||.|..|.|.||| |.|||||| ||..||
BL04042___ypi 432 AGACGGCATCGCCCCTTTAAGAAAGTGGGC---GCATTCCGAGTTTACGC 478
BSNT_03256 620 ACGAAGGATGTATCAATGAAGCGGTACGAGTCGCCAGAAAAAGCGTTGTG 669
..||.||...|.|..|||||||..|.||.||||||||||||||.||.||.
BL04042___ypi 479 TTGACGGCGCTTTACATGAAGCCCTTCGGGTCGCCAGAAAAAGAGTGGTT 528
BSNT_03256 670 CTAAAAGACCACTGGAAAAGCCCGCGATTTGAACAGTTTGGTTTTAACGT 719
||.||||||||||||||.||.|||||.||||||.|.|..||.|||..|||
BL04042___ypi 529 CTGAAAGACCACTGGAAGAGTCCGCGCTTTGAAAAATACGGATTTTCCGT 578
BSNT_03256 720 CATGAAAAGAAAAACAGCACTGTTCCATTATGGCGTCATTCAAACAAGCC 769
.|..|||.|.|||||.||.|||||.|||||.||.|||.|..|||.|
BL04042___ypi 579 AAAAAAACGCAAAACGGCCCTGTTTCATTACGGTGTCCTCGAAAAA---- 624
BSNT_03256 770 CGTGA 774
|||
BL04042___ypi 625 --TGA 627
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