Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05581 and BL04040

See DNA alignment / Visit BSNT_05581 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:42
# Commandline: needle
#    -asequence pep-align/BSNT_05581___ywnH.1.5803.seq
#    -bsequence pep-align/BL04040___ywnH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05581___ywnH-BL04040___ywnH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05581___ywnH-BL04040___ywnH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05581___ywnH
# 2: BL04040___ywnH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 167
# Identity:     119/167 (71.3%)
# Similarity:   137/167 (82.0%)
# Gaps:           4/167 ( 2.4%)
# Score: 631.0
# 
#
#=======================================

BSNT_05581___      1 MNMTLRLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFLGHTE     50
                       |.||:|...||.|||.|||||||||||||||||||||:|:.|||.|||
BL04040___ywn      1 --MKLRIANREDLPAVVDIYNSTIASRMVTADTEPVTPEERLNWFLSHTE     48

BSNT_05581___     51 ARPLYVAEDENGNVAAWISFETFYGRPAYNKTAEVSIYIDEACRGKGVGS    100
                     .||||:||:|..::..|||||:|||||||.||||||||:.|..||||.||
BL04040___ywn     49 ERPLYIAENEKRDIVGWISFESFYGRPAYAKTAEVSIYLHEDHRGKGAGS     98

BSNT_05581___    101 YLLQEALRIAPDLGIRSLMAFIFGHNKPSLKLFEKHGFAEWGLFPGIAEM    150
                     .:|::||..||.|||||||||||.||:||:|||:|:||.|||.|||||||
BL04040___ywn     99 AVLEKALEAAPKLGIRSLMAFIFAHNEPSMKLFKKYGFTEWGHFPGIAEM    148

BSNT_05581___    151 DGKRYDLKILGRELS--    165
                     ||.||||||||:||:  
BL04040___ywn    149 DGIRYDLKILGKELNEA    165


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