Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05587 and BL04038

See DNA alignment / Visit BSNT_05587 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:42
# Commandline: needle
#    -asequence pep-align/BSNT_05587___ywnC.1.5803.seq
#    -bsequence pep-align/BL04038___ywnC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05587___ywnC-BL04038___ywnC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05587___ywnC-BL04038___ywnC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05587___ywnC
# 2: BL04038___ywnC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 134
# Identity:      54/134 (40.3%)
# Similarity:    78/134 (58.2%)
# Gaps:          11/134 ( 8.2%)
# Score: 265.5
# 
#
#=======================================

BSNT_05587___      1 -MNPETMNKTLISISKWGKATGILFIIMGAITALSGAFFFLIGAVPGVLQ     49
                      ...::|.|:|.:|:||||.||:..||.|.|.|..|....:|||.||||.
BL04038___ywn      1 MEMTDSMKKSLDAIAKWGKITGVFMIIAGGIYAFFGISLLIIGAAPGVLM     50

BSNT_05587___     50 IISGIFLMRSAREAGQMAEHNSGQSEDLMLENYAKFVKMQGIYLIVSIAV     99
                     |.|||:|::||..|.:|:.....:..:.:|:||.||:|.|..||:.:|.:
BL04038___ywn     51 IFSGIYLLKSANAAQKMSHDMPQEPHEALLDNYVKFMKWQFFYLLSNIVI    100

BSNT_05587___    100 SILAIIAFFIFLMLGIADGLFSDTYSTY------    127
                     .||.||.||..:.||:    .:|:||.|      
BL04038___ywn    101 FILCIIVFFFLIFLGV----LADSYSGYDPYYYE    130


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.