Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01794 and BL04034

See DNA alignment / Visit BSNT_01794 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:17
# Commandline: needle
#    -asequence pep-align/BSNT_01794___yhjM.1.5803.seq
#    -bsequence pep-align/BL04034___ntdR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01794___yhjM-BL04034___ntdR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01794___yhjM-BL04034___ntdR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01794___yhjM
# 2: BL04034___ntdR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 329
# Identity:     188/329 (57.1%)
# Similarity:   244/329 (74.2%)
# Gaps:           0/329 ( 0.0%)
# Score: 988.0
# 
#
#=======================================

BSNT_01794___      1 MPTIDEIAKLCNVSKTTVSRVLNNHPYVSKEKRDMILKAINELDYTPNYL     50
                     ||||||||||.||||||||||||:|||||:|||..:|:.|.:|||.||..
BL04034___ntd      1 MPTIDEIAKLSNVSKTTVSRVLNDHPYVSEEKRKRVLEVIEKLDYIPNTS     50

BSNT_01794___     51 ARNFRRNKTQTIALSVPSIDHPFFAQLIKGVSHEALFKNYKVIVFQTFYD    100
                     ||..|.|||..:|:|||..||||||||:|.:|.|||...||||||||||.
BL04034___ntd     51 ARKLRSNKTMFLAVSVPHADHPFFAQLMKHMSAEALKHQYKVIVFQTFYQ    100

BSNT_01794___    101 KQTELELLELLKHKEVDGIILGTLENEWDQISPFLKYGPILLCNEYHHSA    150
                     ||.||::|||||.|||||::|.:|||||:.|..::||||:::.||:|..|
BL04034___ntd    101 KQNELKVLELLKRKEVDGVMLCSLENEWEDIKKYVKYGPVVMANEFHAEA    150

BSNT_01794___    151 DITIIGYDEFEATYMGVVHLIERGHKKIGFCFDTPYSEAQCQRKEGYLKA    200
                     |:.:|.||||||.|.|....|::||..:.||.||.:|:||..||||::||
BL04034___ntd    151 DVPVICYDEFEAGYKGTELFIQKGHHLMAFCCDTIHSKAQIMRKEGFMKA    200

BSNT_01794___    201 LQDYDLHHRSEWIFGEMFNIEDGFRVFHKIKDLKDRPSAIFTGNDQVAAG    250
                     |.|..|..:.:|:|...|.|.||||:..:|.::.::|:||||||||||||
BL04034___ntd    201 LSDAGLRFQEKWMFSHAFTIHDGFRIMDQIHNMSEKPTAIFTGNDQVAAG    250

BSNT_01794___    251 IIKQAMKNGFKVPEDLAVIGFDNQLICQVVTPTITTIDIPVIELGQQAVL    300
                     |||:|....::||:.|||:|:|||.||:|..|.||||||||.||.|:||.
BL04034___ntd    251 IIKRARYYQYEVPKQLAVLGYDNQSICEVTDPEITTIDIPVEELAQKAVC    300

BSNT_01794___    301 KIIESISGNATLNRRIIKLPTKLIIREST    329
                     .::..::|.:.|.|.::.|...|.||:|.
BL04034___ntd    301 AMVNLLNGESGLQRDVVTLSPALKIRQSV    329


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