Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00313 and BL04015
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:58
# Commandline: needle
# -asequence pep-align/BSNT_00313___ybbB.1.5803.seq
# -bsequence pep-align/BL04015___ybbB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00313___ybbB-BL04015___ybbB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00313___ybbB-BL04015___ybbB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00313___ybbB
# 2: BL04015___ybbB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 532
# Identity: 318/532 (59.8%)
# Similarity: 407/532 (76.5%)
# Gaps: 4/532 ( 0.8%)
# Score: 1650.0
#
#
#=======================================
BSNT_00313___ 1 MQNAVIYQPVQIEYLKKTSDLFSEQQLADSFVLIFHLKGNGYISIGTNTN 50
|:::..|:.:||::::|..||..||||||||||||||||.|.|.|..:..
BL04015___ybb 1 MKSSYFYRLLQIDHIRKPGDLPDEQQLADSFVLIFHLKGEGRIDIQASGR 50
BSNT_00313___ 51 PLQKKTLYVCPPNETFGFTPAADGHIDACLIRLQSYIKEAGQDIFTPCTE 100
||||:|||:.||.||||.| |:...|...|||||.|..|..:......|:
BL04015___ybb 51 PLQKETLYIVPPYETFGIT-ASSEEISVYLIRLQPYCYEDRRLTLQADTD 99
BSNT_00313___ 101 SE-LAKLKLINVSHIENLAVRLQELAALWNESSQLSQLKCGIEVQSLIYD 149
.: .:.|:::||..:.|||.|||||:|||..||.|.:|||..::|.|:||
BL04015___ybb 100 PDAFSDLQMMNVHPVGNLASRLQELSALWPASSALQELKCQADLQQLLYD 149
BSNT_00313___ 150 LFTASLSDQTDTHSAIEKTKHYIETHADTKITLAQLSQMAGISAKHYSES 199
:::|.|:...:|.|||.|||.|||.|:|..:||.||:||||||||||||.
BL04015___ybb 150 IYSAKLTHPENTASAIGKTKEYIEEHSDAHLTLDQLAQMAGISAKHYSER 199
BSNT_00313___ 200 FKKWTGQSVTEFITKTRITKAKLLMAKSNCKLKEIAHQTGYQDEFYFSRI 249
|||..|||||||||:||:||||.||||::.||:||:.|.||||||||||.
BL04015___ybb 200 FKKLYGQSVTEFITETRMTKAKQLMAKASYKLREISSQIGYQDEFYFSRT 249
BSNT_00313___ 250 FKKYTGCSPTSYMKKRRKKIAAYGRGTMGHLIPLHHIPFAAALHPKWTSY 299
|||:||.|||.||||||:|:||||:.|:|.|||||.||:||:||||||||
BL04015___ybb 250 FKKHTGLSPTVYMKKRRRKLAAYGQNTIGQLIPLHLIPYAASLHPKWTSY 299
BSNT_00313___ 300 YYQHYSTDIPVQLSAYRFNEKWEENLYTLSQAEPDVIVSMDSISPEEQDR 349
||:||:.||||.||||||:|.|||||.|||.|:|::|:||||:|.||:::
BL04015___ybb 300 YYKHYAADIPVHLSAYRFHEPWEENLRTLSSADPELIISMDSVSHEEREQ 349
BSNT_00313___ 350 LNRIAEVMYLPSEESWRTHFLQTASFLKEESEAEKWLADYDQQTTAAKKT 399
|..||:|.:|||:|.||.||:.|||.|.||:||.|||..|.:.|..||:.
BL04015___ybb 350 LQSIADVFFLPSQEQWRRHFMLTASHLDEEAEAHKWLLSYQRLTETAKEA 399
BSNT_00313___ 400 LQHVQGLR-FLFLRLHKQNFYLAHNRSVREVFFGDLGLSSATTADTPSEQ 448
|..:.|.| ||||||||...||||||||::|||||||..||.:.:.|:::
BL04015___ybb 400 LYPICGRRSFLFLRLHKHEIYLAHNRSVQDVFFGDLGFESAVSLEEPTDR 449
BSNT_00313___ 449 AISLENIANYQADCMMLFLFKEPETIAYYQQLQQTEAWQNLSAVRNKRVY 498
|:|:|.||.||.|.:|:|:||||||:|:|::|||:.|||:|.|||:.|||
BL04015___ybb 450 AVSIETIAAYQPDIIMIFIFKEPETLAFYRELQQSAAWQDLKAVRHHRVY 499
BSNT_00313___ 499 LLSLDPWNEYSACGHERIVQQTVSLLSGDCP- 529
.::.|||.|||||.||||::|.|.||||..|
BL04015___ybb 500 QVNSDPWREYSACSHERIIRQAVRLLSGKNPF 531
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