Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05604 and BL04008

See DNA alignment / Visit BSNT_05604 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:43
# Commandline: needle
#    -asequence pep-align/BSNT_05604___fdhD.1.5803.seq
#    -bsequence pep-align/BL04008___fdhD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05604___fdhD-BL04008___fdhD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05604___fdhD-BL04008___fdhD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05604___fdhD
# 2: BL04008___fdhD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 263
# Identity:     195/263 (74.1%)
# Similarity:   222/263 (84.4%)
# Gaps:           1/263 ( 0.4%)
# Score: 1006.0
# 
#
#=======================================

BSNT_05604___      1 MNDKVTAVRDVWRYEQGEISKVEDRMVTEFPLTVILNGSEFVTLVCTPEH     50
                     |...:|..|.::||:.||:.:.||:|.|||||||::||.|||||||:|:.
BL04008___fdh      1 MGKNITTSRKIFRYDNGELVQQEDQMATEFPLTVMVNGEEFVTLVCSPDS     50

BSNT_05604___     51 IEELVIGFLASEGVIRFQKEIKRFTIDESLGFVYVDLVHPETLDQKDYTK    100
                     :||||||||||||||||:.|||||||||||||.|||||..:.|..|||||
BL04008___fdh     51 LEELVIGFLASEGVIRFKNEIKRFTIDESLGFAYVDLVSTKKLQLKDYTK    100

BSNT_05604___    101 RVIGSCCGKGRHFYFQQDVKTAKTAVSQIKISPEACLALMKDMQQGSGTF    150
                     |||||||||||||||||||||||||:..:.|:||.||.||:|||:.|..|
BL04008___fdh    101 RVIGSCCGKGRHFYFQQDVKTAKTAIDGVTITPENCLKLMRDMQKSSKLF    150

BSNT_05604___    151 QDTGGVHNAALCDTEKLLLMRTDIGRHNALDKLYGHCLLNGMSVRDKLIV    200
                     ..||||||||||.|:||:.:|:|||||||||||||:|||:.:.|||||||
BL04008___fdh    151 HHTGGVHNAALCSTDKLIAVRSDIGRHNALDKLYGYCLLHQVPVRDKLIV    200

BSNT_05604___    201 FSGRISSEVLLKAAKIGVSIVISKSAPTELAIQMAEELNITAIGFVRNGS    250
                     |||||||||||||||||||.||||||||||||||||||||..|||.||.|
BL04008___fdh    201 FSGRISSEVLLKAAKIGVSAVISKSAPTELAIQMAEELNIMTIGFARNRS    250

BSNT_05604___    251 FNVYTHPERIRG-    262
                     ||||||.|||:. 
BL04008___fdh    251 FNVYTHHERIQFS    263


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