Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05620 and BL04001

See DNA alignment / Visit BSNT_05620 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:43
# Commandline: needle
#    -asequence pep-align/BSNT_05620___atpC.1.5803.seq
#    -bsequence pep-align/BL04001___atpC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05620___atpC-BL04001___atpC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05620___atpC-BL04001___atpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05620___atpC
# 2: BL04001___atpC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 132
# Identity:     109/132 (82.6%)
# Similarity:   119/132 (90.2%)
# Gaps:           1/132 ( 0.8%)
# Score: 536.0
# 
#
#=======================================

BSNT_05620___      1 MKTVKVNIVTPDGPVYDADIEMVSVRAESGDLGILPGHIPTVAPLKIGAV     50
                     |||:||||||||||||||||||||||||||:||||||||||||||||.||
BL04001___atp      1 MKTLKVNIVTPDGPVYDADIEMVSVRAESGELGILPGHIPTVAPLKIAAV     50

BSNT_05620___     51 RLKKDGQTEMVAVSGGFVEVRPDQVTILAQAAETAEGIDKERAEAARQRA    100
                     |||||||||:||||||.||||||.||||||.|||:|.||||||.||::||
BL04001___atp     51 RLKKDGQTELVAVSGGIVEVRPDHVTILAQTAETSEQIDKERALAAKRRA    100

BSNT_05620___    101 QERLNSQSDDTDIRRAELALQRALNRLDVAGK    132
                     :|||..|:.|.||.||||||:||:||||||. 
BL04001___atp    101 EERLQKQTPDVDIIRAELALKRAINRLDVAR-    131


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