Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05627 and BL03996

See DNA alignment / Visit BSNT_05627 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:44
# Commandline: needle
#    -asequence pep-align/BSNT_05627___atpF.1.5803.seq
#    -bsequence pep-align/BL03996___atpF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05627___atpF-BL03996___atpF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05627___atpF-BL03996___atpF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05627___atpF
# 2: BL03996___atpF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 172
# Identity:     137/172 (79.7%)
# Similarity:   161/172 (93.6%)
# Gaps:           2/172 ( 1.2%)
# Score: 660.5
# 
#
#=======================================

BSNT_05627___      1 MSQLP--LELGLSFNGGDILFQLLAMLILLALLKKYALGPLLNIMKQRED     48
                     ||.||  :..|:.||.|.:||||:||||||||||||||||||||||:|||
BL03996___atp      1 MSFLPQVMGAGVGFNAGTMLFQLVAMLILLALLKKYALGPLLNIMKERED     50

BSNT_05627___     49 HIAGEITSAEEKNKEAQQLIEEQRVLLKEARQESQTLIENAKKLGEKQKE     98
                     :|.|||:|||:||:||::|||||:.||||||:|||:||||||||||:||:
BL03996___atp     51 YITGEISSAEKKNEEAKKLIEEQQALLKEAREESQSLIENAKKLGEQQKD    100

BSNT_05627___     99 EIIQAARAESERLKEAARTEIVKEKEQAVSALREQVASLSVMIASKVIEK    148
                     |||:|||.|:||:||:||:|||||::|||:||||||||||||||||||||
BL03996___atp    101 EIIKAARQEAERMKESARSEIVKERDQAVTALREQVASLSVMIASKVIEK    150

BSNT_05627___    149 ELDEQAQEKLIQDYLKEVGESR    170
                     ||||||||||||||||||||||
BL03996___atp    151 ELDEQAQEKLIQDYLKEVGESR    172


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