Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05635 and BL03992
See
DNA alignment /
Visit
BSNT_05635 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:44
# Commandline: needle
# -asequence pep-align/BSNT_05635___upp.1.5803.seq
# -bsequence pep-align/BL03992___upp.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05635___upp-BL03992___upp.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05635___upp-BL03992___upp.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05635___upp
# 2: BL03992___upp
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 209
# Identity: 193/209 (92.3%)
# Similarity: 203/209 (97.1%)
# Gaps: 0/209 ( 0.0%)
# Score: 999.0
#
#
#=======================================
BSNT_05635___ 1 MGKVYVFDHPLIQHKLTYIRNENTGTKDFRELVDEVATLMAFEITRDLPL 50
||||||||||||||||||||:..||||:||||||||||||||||||||||
BL03992___upp 1 MGKVYVFDHPLIQHKLTYIRDVKTGTKEFRELVDEVATLMAFEITRDLPL 50
BSNT_05635___ 51 EEVDINTPVQAAKSKVISGKKLGVVPILRAGLGMVDGILKLIPAAKVGHV 100
|||::.||||.|||.||:||||||||||||||||||||||||||||||||
BL03992___upp 51 EEVNVETPVQMAKSNVIAGKKLGVVPILRAGLGMVDGILKLIPAAKVGHV 100
BSNT_05635___ 101 GLYRDPETLKPVEYYVKLPSDVEEREFIVVDPMLATGGSAVEAIHSLKKR 150
|||||||||||||||||||||||||||||||||||||||||||::|||||
BL03992___upp 101 GLYRDPETLKPVEYYVKLPSDVEEREFIVVDPMLATGGSAVEALNSLKKR 150
BSNT_05635___ 151 GAKNIRFMCLVAAPEGVEELQKHHSDVDIYIAALDEKLNEKGYIVPGLGD 200
||||||||||:||||||:|:||||.|||||||||||||||||||||||||
BL03992___upp 151 GAKNIRFMCLIAAPEGVDEVQKHHPDVDIYIAALDEKLNEKGYIVPGLGD 200
BSNT_05635___ 201 AGDRMFGTK 209
|||||||||
BL03992___upp 201 AGDRMFGTK 209
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.