Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05644 and BL03986
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:45
# Commandline: needle
# -asequence pep-align/BSNT_05644___ywlC.1.5803.seq
# -bsequence pep-align/BL03986___ywlC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05644___ywlC-BL03986___ywlC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05644___ywlC-BL03986___ywlC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05644___ywlC
# 2: BL03986___ywlC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 347
# Identity: 247/347 (71.2%)
# Similarity: 291/347 (83.9%)
# Gaps: 1/347 ( 0.3%)
# Score: 1304.0
#
#
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BSNT_05644___ 1 MKTKRWFVDVTDELSTNDPQIAQAAALLRENEVVAFPTETVYGLGANAKN 50
||||.|.|||..:||||.|||||||.||::||.||||||||||||||||:
BL03986___ywl 1 MKTKVWTVDVKRDLSTNCPQIAQAARLLQQNETVAFPTETVYGLGANAKH 50
BSNT_05644___ 51 TDAVKKIYEAKGRPSDNPLIVHIADISQLEDLTGPAPEKAKTLMKRFWPG 100
::||.|||||||||||||||||||:|.||.:.......:|:.||||||||
BL03986___ywl 51 SEAVAKIYEAKGRPSDNPLIVHIAEIEQLAEFAEVDSPQAEMLMKRFWPG 100
BSNT_05644___ 101 ALTLILPCKPGALSPRVTAGLDTVAIRMPDHPLALALIRESGLPIAAPSA 150
.|||:||||||.||.||||||||||:||||||:||.|||::|:|:|||||
BL03986___ywl 101 PLTLVLPCKPGVLSTRVTAGLDTVAVRMPDHPVALELIRQAGVPVAAPSA 150
BSNT_05644___ 151 NLSGKPSPTKAEHVAHDLDGRIAGIMDGGPTGIGVESTVLSCADDIPVLL 200
||||||||||||||.:||:|||||::||||||:||||||:||..:|||:|
BL03986___ywl 151 NLSGKPSPTKAEHVVNDLNGRIAGVVDGGPTGVGVESTVVSCTGEIPVIL 200
BSNT_05644___ 201 RPGGITKEQIEAVIGPIHVDKGLSDQNEKPISPGMKYTHYAPTAPLAICE 250
||||:||||:|...||:.:|:||:|:.:.|:|||||||||||.|||||..
BL03986___ywl 201 RPGGVTKEQLEEAAGPVLIDQGLTDEKKAPMSPGMKYTHYAPEAPLAIVN 250
BSNT_05644___ 251 GSPERIQHLIQEYQQGGRRVGVLTTEENAGVYSADYVKSCGRRAQLETVA 300
|..|.||.||.:||:.|.:||||||||.|.||.||.|:.||||.:|||||
BL03986___ywl 251 GGVEDIQRLIDQYQKDGMKVGVLTTEERADVYQADAVRICGRRDRLETVA 300
BSNT_05644___ 301 AGLYDALRSFDENKVDLIISESFPDTGVGLAIMNRLMKAAGGRVIR- 346
|||||.||||||.::|.|.:||||:.|||.||||||:||||.|||.
BL03986___ywl 301 AGLYDVLRSFDEERLDFIFAESFPEEGVGRAIMNRLLKAAGHRVIEA 347
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