Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01789 and BL03983
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:16
# Commandline: needle
# -asequence pep-align/BSNT_01789___glcP.1.5803.seq
# -bsequence pep-align/BL03983___glcP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01789___glcP-BL03983___glcP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01789___glcP-BL03983___glcP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01789___glcP
# 2: BL03983___glcP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 407
# Identity: 170/407 (41.8%)
# Similarity: 256/407 (62.9%)
# Gaps: 14/407 ( 3.4%)
# Score: 829.5
#
#
#=======================================
BSNT_01789___ 1 MLRGTYLFGYAFFFTVGIIHISTGSLTPFLLESFNKTTDDISVIIFFQFT 50
::..:|||.:|:|.||:|||..|||:|::::.:.:...|:|.:||||||
BL03983___glc 1 -MKKIFLFGCSFYFLVGVIHILLGSLSPYIIQEYQRDLHDLSFLIFFQFT 49
BSNT_01789___ 51 GFLSGVLIAPLMIKKYSHFRTLTLALTIMLAALSIFFLTKDWYYIIVMAF 100
|||:|||:||:.:::.||...||..|.::|..|...||...:.:.::|.|
BL03983___glc 50 GFLNGVLLAPMFVRRTSHTAVLTFGLLLILVTLLGVFLFDMFIFFVIMGF 99
BSNT_01789___ 101 LLGYGAGTLETTVGSFVIANFESNAEKMSKLEVLFGLGALSFPLLINSFI 150
|||:||||||||:|::|||. :.||:.|:.|||.||||||.||.||....
BL03983___glc 100 LLGFGAGTLETTMGAYVIAQ-DKNAKGMNILEVFFGLGALLFPFLIYILT 148
BSNT_01789___ 151 DINNWFLPYYCIFTFLFVLFVGWLIFLSKNRKYAKNANQQVTFPDGGAFQ 200
:...|..|.|.:|.|:|||...|:::| .||....|:.|:.:.:.....
BL03983___glc 149 ERYAWHFPLYALFIFVFVLACMWVVYL--RRKTPGTASGQMAYQEKPTVS 196
BSNT_01789___ 201 YFIGDRKKSKQLGFFVFFAFLYAGIETNFANFLPSIMINQDNEQISLISV 250
......:|.|.:..|:.|||:|||||||||||||::|:.:..|:||:|||
BL03983___glc 197 AIFETGRKEKNIFLFLIFAFVYAGIETNFANFLPALMLEKGAEEISVISV 246
BSNT_01789___ 251 SFFWVGIIIGRILIGLVSRRLDFSKYLLFSCSCLIVLLIAFSYISNPILQ 300
:|||.|::.||:|..:...|:....:|:||...|.|||:..::......|
BL03983___glc 247 TFFWTGMVCGRLLTSIFGGRITSVAFLIFSAGALTVLLLILAWFPVHQTQ 296
BSNT_01789___ 301 LGGTFLIGLSIAGIFPIALTLASIIIQKYVDEVTSLFIASASFGGAIISF 350
|...|.||||.|||||.|:||||:..:.:.:|:|||||:|||.|||::||
BL03983___glc 297 LLLVFFIGLSAAGIFPCAVTLASLAGKPFTEEITSLFISSASLGGALLSF 346
BSNT_01789___ 351 LIGWSLNQD-TILLTMGIFTTMAVILVGISVKIRRTKTEDPISLENKASK 399
||||:::.. ..:....:|..:..:|:.||..|..:..: :||.|.
BL03983___glc 347 LIGWAIDASAAAVFPFLLFGGLGGLLLAISAVIFLSGLQ-----KNKQSH 391
BSNT_01789___ 400 TRVNERY 406
..:
BL03983___glc 392 LDM---- 394
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