Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01789 and BL03983

See DNA alignment / Visit BSNT_01789 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:16
# Commandline: needle
#    -asequence pep-align/BSNT_01789___glcP.1.5803.seq
#    -bsequence pep-align/BL03983___glcP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01789___glcP-BL03983___glcP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01789___glcP-BL03983___glcP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01789___glcP
# 2: BL03983___glcP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 407
# Identity:     170/407 (41.8%)
# Similarity:   256/407 (62.9%)
# Gaps:          14/407 ( 3.4%)
# Score: 829.5
# 
#
#=======================================

BSNT_01789___      1 MLRGTYLFGYAFFFTVGIIHISTGSLTPFLLESFNKTTDDISVIIFFQFT     50
                      ::..:|||.:|:|.||:|||..|||:|::::.:.:...|:|.:||||||
BL03983___glc      1 -MKKIFLFGCSFYFLVGVIHILLGSLSPYIIQEYQRDLHDLSFLIFFQFT     49

BSNT_01789___     51 GFLSGVLIAPLMIKKYSHFRTLTLALTIMLAALSIFFLTKDWYYIIVMAF    100
                     |||:|||:||:.:::.||...||..|.::|..|...||...:.:.::|.|
BL03983___glc     50 GFLNGVLLAPMFVRRTSHTAVLTFGLLLILVTLLGVFLFDMFIFFVIMGF     99

BSNT_01789___    101 LLGYGAGTLETTVGSFVIANFESNAEKMSKLEVLFGLGALSFPLLINSFI    150
                     |||:||||||||:|::|||. :.||:.|:.|||.||||||.||.||....
BL03983___glc    100 LLGFGAGTLETTMGAYVIAQ-DKNAKGMNILEVFFGLGALLFPFLIYILT    148

BSNT_01789___    151 DINNWFLPYYCIFTFLFVLFVGWLIFLSKNRKYAKNANQQVTFPDGGAFQ    200
                     :...|..|.|.:|.|:|||...|:::|  .||....|:.|:.:.:.....
BL03983___glc    149 ERYAWHFPLYALFIFVFVLACMWVVYL--RRKTPGTASGQMAYQEKPTVS    196

BSNT_01789___    201 YFIGDRKKSKQLGFFVFFAFLYAGIETNFANFLPSIMINQDNEQISLISV    250
                     ......:|.|.:..|:.|||:|||||||||||||::|:.:..|:||:|||
BL03983___glc    197 AIFETGRKEKNIFLFLIFAFVYAGIETNFANFLPALMLEKGAEEISVISV    246

BSNT_01789___    251 SFFWVGIIIGRILIGLVSRRLDFSKYLLFSCSCLIVLLIAFSYISNPILQ    300
                     :|||.|::.||:|..:...|:....:|:||...|.|||:..::......|
BL03983___glc    247 TFFWTGMVCGRLLTSIFGGRITSVAFLIFSAGALTVLLLILAWFPVHQTQ    296

BSNT_01789___    301 LGGTFLIGLSIAGIFPIALTLASIIIQKYVDEVTSLFIASASFGGAIISF    350
                     |...|.||||.|||||.|:||||:..:.:.:|:|||||:|||.|||::||
BL03983___glc    297 LLLVFFIGLSAAGIFPCAVTLASLAGKPFTEEITSLFISSASLGGALLSF    346

BSNT_01789___    351 LIGWSLNQD-TILLTMGIFTTMAVILVGISVKIRRTKTEDPISLENKASK    399
                     ||||:::.. ..:....:|..:..:|:.||..|..:..:     :||.|.
BL03983___glc    347 LIGWAIDASAAAVFPFLLFGGLGGLLLAISAVIFLSGLQ-----KNKQSH    391

BSNT_01789___    400 TRVNERY    406
                     ..:    
BL03983___glc    392 LDM----    394


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