Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01790 and BL03982

See DNA alignment / Visit BSNT_01790 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:16
# Commandline: needle
#    -asequence pep-align/BSNT_01790___yhjJ.1.5803.seq
#    -bsequence pep-align/BL03982___ntdC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01790___yhjJ-BL03982___ntdC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01790___yhjJ-BL03982___ntdC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01790___yhjJ
# 2: BL03982___ntdC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 352
# Identity:     189/352 (53.7%)
# Similarity:   248/352 (70.5%)
# Gaps:           6/352 ( 1.7%)
# Score: 953.0
# 
#
#=======================================

BSNT_01790___      1 MKKIGIIGAGGIARAQATALSTIKNAELVGVYDINQQNAESFVKTFGGKS     50
                      .|||||||||||:|.|.||||:|.|||.|.:|||...:......:||.:
BL03982___ntd      1 -MKIGIIGAGGIAKAHAKALSTVKGAELSGFFDINSLASRKCAFEYGGTA     49

BSNT_01790___     51 FENADELIDASEGLIVASPNFCHKEHALQALGKHKHVLCEKPMAISLEEA    100
                     |.:..||::.|..:||:|||||||||||:|:...|:||||||||:|:|||
BL03982___ntd     50 FTSMQELLNQSTAVIVSSPNFCHKEHALEAMAAGKYVLCEKPMAVSMEEA     99

BSNT_01790___    101 SIMKDTAERLSVRASMGFNYRYLSYVNILKSLIINNELGNILSIKVHFKK    150
                     ..||..|.:.:....||||||:|::|..||.:|..||||:||||.|||||
BL03982___ntd    100 EEMKSRASQSAYIPIMGFNYRHLTFVKRLKDMISGNELGDILSINVHFKK    149

BSNT_01790___    151 NSALRRKKFTWRDDANSKKTSGSLGDLGIHLIDMVWYLFESDFITESVRA    200
                     ||||||||:||||.:.|.||||:|||||:||||::.|||:|.|..:|::.
BL03982___ntd    150 NSALRRKKYTWRDHSKSNKTSGALGDLGVHLIDLILYLFDSPFKLDSLKV    199

BSNT_01790___    201 KMNTNVKTKEDKQVLVDDYAEIYGQLKNKVFVNIITSKCSVPEDCGFSIE    250
                     ||.|.||.||.|||.|||::|:||||:|.||||:|||||:..::||||||
BL03982___ntd    200 KMMTVVKEKEQKQVYVDDHSEVYGQLENHVFVNMITSKCTKSDECGFSIE    249

BSNT_01790___    251 VVGHKKEFKYHTGNPHVYKLIDGLNVVDCPVPQSLLNDPPNEFYGWADSF    300
                     |.|....|.||:...:.:.|..||......:|.:.|.||.||||||||||
BL03982___ntd    250 VNGQNGVFYYHSRQKNQFLLRAGLTEQMITMPDTWLTDPENEFYGWADSF    299

BSNT_01790___    301 RSELINWIASTQN-DWVEIPSFSDGFRSQEVLEMFFEKDSNSQPMSVS-A    348
                     |.:||.|:...:: ::..:.:|.||:::|..|..||.|   .|.:|:| .
BL03982___ntd    300 RVQLIQWMNGIRDRNFASLATFEDGYKTQFYLNEFFNK---GQQLSLSKQ    346

BSNT_01790___    349 VN    350
                     .|
BL03982___ntd    347 AN    348


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