Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01793 and BL03980
See
DNA alignment /
Visit
BSNT_01793 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:16
# Commandline: needle
# -asequence pep-align/BSNT_01793___yhjL.1.5803.seq
# -bsequence pep-align/BL03980___ntdA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01793___yhjL-BL03980___ntdA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01793___yhjL-BL03980___ntdA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01793___yhjL
# 2: BL03980___ntdA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 447
# Identity: 230/447 (51.5%)
# Similarity: 315/447 (70.5%)
# Gaps: 16/447 ( 3.6%)
# Score: 1191.0
#
#
#=======================================
BSNT_01793___ 1 MQKQVKISGK-----SKENMSLLKHLKGDVQGKELVIEDSIVNERWKQVL 45
:|.:.: ||:...||..||......|..|:|::.|::.|:.|
BL03980___ntd 1 ----MKTANENMTCTSKQLFVLLNDLKEGKLAGECRIDDTLANQKLKETL 46
BSNT_01793___ 46 -KEKIDIEHDLFNYQKNREISKVPFLPVDRLITNDEVEDILNTLTEVLPT 94
:::.||..:|.| :.:...|:|.|:|:.||||.:||:|:::.:.:||||
BL03980___ntd 47 QQDQFDITANLLN-RMDSPPSRVDFMPLHRLITEEEVDDVVHAVKDVLPT 95
BSNT_01793___ 95 GKFTSGPYLEQFENVLSTYLHKRYVIATSSGTDAIMIGLLALGLNPGDEV 144
|:||||.|:..||..::.:|.|::|:|:||||||:::.|.|.|:..||||
BL03980___ntd 96 GQFTSGFYVGVFEAEIAAFLSKKHVMASSSGTDAMIVALKAAGVGQGDEV 145
BSNT_01793___ 145 IMPANSFSATENAVLALGGVPIYVDINPQTFCIDPDKIEEAITPYTKFIL 194
|||||||:||||||||.||.||:.||:|.|||:||.:||..:|..||.||
BL03980___ntd 146 IMPANSFAATENAVLAAGGTPIFCDIDPVTFCMDPSEIEACVTLKTKCIL 195
BSNT_01793___ 195 PVHLYGKHSDMQHIRQIANRYELKVIEDACQGIGLTDLGKYADITTLSFN 244
|||||||..||:.|.:.|::|.:.:||||||.||::||||.:..:.||||
BL03980___ntd 196 PVHLYGKLPDMEAIAKTADKYGIPIIEDACQAIGVSDLGKNSLCSILSFN 245
BSNT_01793___ 245 PYKNLGVCGKAGAIATDNEELAKKCIQFSYHGFEVNVKNKKVINFGFNSK 294
||||||.|||||||.||:...|..|:::.|||||:|.||||..::|||:|
BL03980___ntd 246 PYKNLGTCGKAGAIVTDDPSFASACMEYMYHGFELNQKNKKAADYGFNAK 295
BSNT_01793___ 295 MDNLQAAIGLERMKYLSLNNFKRLFLADRYITQLAELQNKGFIELPELSE 344
:|||||||||.|||||||||.|||:||||||..|.:.:::|.|:||::::
BL03980___ntd 296 IDNLQAAIGLARMKYLSLNNLKRLYLADRYIAHLQQYEDRGLIKLPQMTD 345
BSNT_01793___ 345 DHVWHLFPIKVRTEDRADIMTKLNEDFGVQTDVYYPILSHMQKTPLVQDK 394
|||||||.||:...:|..:...:.:...||||:|||||||.|.||||:..
BL03980___ntd 346 DHVWHLFTIKILNGNRDQVKDMMLKFHNVQTDIYYPILSHHQNTPLVKAN 395
BSNT_01793___ 395 YAGLPLVHTEKAHSQVLHLPLYPSFTLEEQDRVMEGLFHVIKQEIGV 441
|....|..||..|.|:|.|||||..|:||||:|||.|..|:.
BL03980___ntd 396 YRHTSLPVTESVHKQMLQLPLYPGLTVEEQDKVMEALIDVVS----- 437
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.